RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MPEG1Q2M385 716 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 LCTLQ6UWM7 567 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 TSPYL5Q86VY4 417 aaPredicted RBP27.72■■■□□ 2.03
SSBP3-204ENST00000371320 AMZ2Q86W34 360 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 KRT78Q8N1N4 520 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 B4GALNT2Q8NHY0 566 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 CSF3RQ99062 836 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 ZDHHC4Q9NPG8 344 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 SCN3BQ9NY72 215 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 INMTO95050 263 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 BCL10O95999 233 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 RRM2P31350 389 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 PRIM2P49643 509 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 CXCR4P61073 352 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 ADGRD2Q7Z7M1 963 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.72■■■□□ 2.032e-6■■■□□ 17
SSBP3-204ENST00000371320 MTERF3Q96E29 417 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 COX14Q96I36 57 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 ACAT2Q9BWD1 397 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 ERVK-18Q9QC07 812 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 ACSL6Q9UKU0 697 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 TSC22D4Q9Y3Q8 395 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 PCDHGB1Q9Y5G3 927 aa27.72■■■□□ 2.03
SSBP3-204ENST00000371320 OPN1SWP03999 348 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 EPHA2P29317 976 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 CHI3L1P36222 383 aaPredicted RBP27.71■■■□□ 2.03
SSBP3-204ENST00000371320 EMX1Q04741 257 aaPredicted RBP27.71■■■□□ 2.03
SSBP3-204ENST00000371320 RBBP4Q09028 425 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 CNTN1Q12860 1018 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 RPA4Q13156 261 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 SCARB2Q14108 478 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 ADAMTSL4Q6UY14 1074 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 VN1R5Q7Z5H4 357 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 DCUN1D3Q8IWE4 304 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 OXR1Q8N573 874 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 TFGQ92734 400 aaPredicted RBP27.71■■■□□ 2.03
SSBP3-204ENST00000371320 HDAC8Q9BY41 377 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 TAS2R9Q9NYW1 312 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 A0A0J9YVX5 310 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 ZNF99A8MXY4 864 aaPredicted RBP27.71■■■□□ 2.03
SSBP3-204ENST00000371320 EPHX1P07099 455 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 IL3P08700 152 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 IL12RB1P42701 662 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 GP2P55259 537 aaKnown RBP27.71■■■□□ 2.03
SSBP3-204ENST00000371320 NPRL3Q12980 569 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 CYP2A13Q16696 494 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 TRIM40Q6P9F5 258 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 HEATR4Q86WZ0 1026 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 EZH1Q92800 747 aaPredicted RBP27.71■■■□□ 2.03
SSBP3-204ENST00000371320 TANKQ92844 425 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 FKBP10Q96AY3 582 aa27.71■■■□□ 2.03
SSBP3-204ENST00000371320 MUC22E2RYF6 1773 aaPredicted RBP27.7■■■□□ 2.02
SSBP3-204ENST00000371320 NDUFS2O75306 463 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 HTR1BP28222 390 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 FADDQ13158 208 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 NPTX1Q15818 432 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 FAM129CQ86XR2 697 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 OR5AK3PQ8NH89 298 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 NFKBIDQ8NI38 313 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 FGF13Q92913 245 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 RAB7BQ96AH8 199 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 DUSP21Q9H596 190 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 NDUFAF4Q9P032 175 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 SLC23A2Q9UGH3 650 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 MAP4K5Q9Y4K4 846 aa27.7■■■□□ 2.02
SSBP3-204ENST00000371320 A0A1W2PRB8 838 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 RPP38P78345 283 aaKnown RBP27.69■■■□□ 2.02
SSBP3-204ENST00000371320 MAD2L1BPQ15013 274 aaPredicted RBP27.69■■■□□ 2.02
SSBP3-204ENST00000371320 PRSS53Q2L4Q9 553 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 LAIR1Q6GTX8 287 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 PNCKQ6P2M8 343 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 KLHL35Q6PF15 583 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 IKBIPQ70UQ0 350 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 FAR1Q8WVX9 515 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 SORBS1Q9BX66 1292 aaKnown RBP27.69■■■□□ 2.02
SSBP3-204ENST00000371320 TMEM38AQ9H6F2 299 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 PRSS16Q9NQE7 514 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 C1GALT1Q9NS00 363 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 TESMINQ9Y4I5 508 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 KIAA1549LQ6ZVL6 1849 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 PCCBP05166 539 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 SLC35A2P78381 396 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 SLC5A12Q1EHB4 618 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 TSEN54Q7Z6J9 526 aaKnown RBP27.69■■■□□ 2.02
SSBP3-204ENST00000371320 RNF130Q86XS8 419 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 LZICQ8WZA0 190 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 MIEF1Q9NQG6 463 aa27.69■■■□□ 2.02
SSBP3-204ENST00000371320 TNFRSF11BO00300 401 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 ADAMDEC1O15204 470 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 IFI44LQ53G44 452 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 SLC9B2Q86UD5 537 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 FAM124AQ86V42 546 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 LRRTM4Q86VH4 590 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 C17orf64Q86WR6 236 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 AHSPQ9NZD4 102 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 ENPP5Q9UJA9 477 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 hCG_2014768A0A024R1R8 64 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 ANTXRLA6NF34 631 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 TNFRSF1BP20333 461 aa27.68■■■□□ 2.02
SSBP3-204ENST00000371320 SOAT1P35610 550 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms