RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 PCNAP12004 261 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 LAMP2P13473 410 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 GSTM2P28161 218 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 CLK3P49761 638 aaKnown RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 COPZ1P61923 177 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 SLC14A1Q13336 389 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 CAMK2GQ13555 558 aaPredicted RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 MAPK11Q15759 364 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.3□□□□□ -0.444e-10■■■■□ 24.7
GPC3-201ENST00000370818 ATG9BQ674R7 924 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 SPARTQ8N0X7 666 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 C1orf52Q8N6N3 182 aaKnown RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 SPERTQ8NA61 448 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 SUN5Q8TC36 379 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 MAGEE2Q8TD90 523 aaPredicted RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 ELSPBP1Q96BH3 223 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 WDR34Q96EX3 536 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 METTL2AQ96IZ6 378 aaKnown RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 ITM2CQ9NQX7 267 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 FBXO8Q9NRD0 319 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 TM7SF3Q9NS93 570 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 RUVBL1Q9Y265 456 aaKnown RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 BTBD3Q9Y2F9 522 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 GPSM3Q9Y4H4 160 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 CEP290O15078 2479 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 RFXANKO14593 260 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 YY2O15391 372 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 PRMT3O60678 531 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 DEAF1O75398 565 aaPredicted RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 APODP05090 189 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 RPS9P46781 194 aaKnown RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 C21orf58P58505 322 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 SLC13A2Q13183 592 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 TSTA3Q13630 321 aaPredicted RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 NKG7Q16617 165 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 MED27Q6P2C8 311 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 MSANTD1Q6ZTZ1 278 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 ZNF551Q7Z340 670 aaPredicted RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 TMEM132CQ8N3T6 1108 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 CHTF18Q8WVB6 975 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 MAGED4Q96JG8 741 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 MUS81Q96NY9 551 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 SP140LQ9H930 580 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 C8orf4Q9NR00 106 aa12.3□□□□□ -0.44
GPC3-201ENST00000370818 MBNL1Q9NR56 388 aaKnown RBP12.3□□□□□ -0.44
GPC3-201ENST00000370818 CXCR6O00574 342 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 PCDH8O95206 1070 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 LDLRP01130 860 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 PNLIPRP1P54315 467 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 RPS13P62277 151 aaKnown RBP12.29□□□□□ -0.44
GPC3-201ENST00000370818 ITPRIPL2Q3MIP1 535 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 ENPP6Q6UWR7 440 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 PDZD3Q86UT5 571 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 AMZ2Q86W34 360 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 MICU2Q8IYU8 434 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 OR8J2Q8NGG1 315 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 OR5AR1Q8NGP9 310 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 OR6Q1Q8NGQ2 317 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 HTRA1Q92743 480 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 IL17FQ96PD4 163 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 SPNS1Q9H2V7 528 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 SLC28A3Q9HAS3 691 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 NTN4Q9HB63 628 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 ADGRE2Q9UHX3 823 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 ZNF639Q9UID6 485 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 ASF1AQ9Y294 204 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 AP3M1Q9Y2T2 418 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 N6AMT1Q9Y5N5 214 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.29□□□□□ -0.44
GPC3-201ENST00000370818 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.29□□□□□ -0.44
GPC3-201ENST00000370818 A0A1W2PP55 124 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 FAM220BPB1ANY3 271 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 UPK1AO00322 258 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 AXIN1O15169 862 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 GSTA4O15217 222 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 KCNK2O95069 426 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 C1GALT1C1LP0DN25 315 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 RAP2AP10114 183 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 UBL4AP11441 157 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 SRSF11Q05519 484 aaKnown RBP12.29□□□□□ -0.44
GPC3-201ENST00000370818 SLBPQ14493 270 aaKnown RBP eCLIP12.29□□□□□ -0.44
GPC3-201ENST00000370818 DPY19L1Q2PZI1 675 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 ATAT1Q5SQI0 421 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 FAAH2Q6GMR7 532 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 UNC5DQ6UXZ4 953 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 FAM20CQ8IXL6 584 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 LAS2Q8IYD9 372 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 OR52E4Q8NGH9 312 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 NRTNQ99748 197 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 TRMT61BQ9BVS5 477 aaKnown RBP12.29□□□□□ -0.44
GPC3-201ENST00000370818 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 PLAGL1Q9UM63 463 aa12.29□□□□□ -0.44
GPC3-201ENST00000370818 PIPSLA2A3N6 862 aa12.28□□□□□ -0.44
GPC3-201ENST00000370818 K7EQS6 105 aa12.28□□□□□ -0.44
GPC3-201ENST00000370818 CRYZL1O95825 349 aa12.28□□□□□ -0.44
GPC3-201ENST00000370818 NTRK1P04629 796 aa12.28□□□□□ -0.44
GPC3-201ENST00000370818 LAMP1P11279 417 aa12.28□□□□□ -0.44
GPC3-201ENST00000370818 COX7A2P14406 83 aa12.28□□□□□ -0.44
GPC3-201ENST00000370818 KIR2DL1P43626 348 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms