RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 STUB1Q9UNE7 303 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 OARD1Q9Y530 152 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 COLEC10Q9Y6Z7 277 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 TRIM3O75382 744 aaPredicted RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 CXCL14O95715 111 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 CD2P06729 351 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 CSNK2A2P19784 350 aaPredicted RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 RBM34P42696 430 aaKnown RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 MAGEA6P43360 314 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ARSDP51689 593 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 NFE2L1Q14494 772 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 SPHARQ15513 63 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 PAGE3Q5JUK9 113 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 SAMD12Q8N8I0 201 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 GPR151Q8TDV0 419 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 C15orf40Q8WUR7 153 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ZC3H10Q96K80 434 aaKnown RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 C1orf74Q96LT6 269 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 NEUROD4Q9HD90 331 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 MED31Q9Y3C7 131 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 GSTT2P0CG29 244 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ANXA3P12429 323 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 SP140Q13342 867 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 DESI1Q6ICB0 168 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF548Q8NEK5 533 aaPredicted RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ATP6V1C2Q8NEY4 427 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 KXD1Q9BQD3 176 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 C14orf105Q9NVL8 296 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 PHRF1Q9P1Y6 1649 aaKnown RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 SCAPQ12770 1279 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 TCEAL5Q5H9L2 206 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 PGM2L1Q6PCE3 622 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 TIGD4Q8IY51 512 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 SAMD14Q8IZD0 417 aaPredicted RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 DTWD1Q8N5C7 304 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 MAELQ96JY0 434 aaKnown RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 GSTO2Q9H4Y5 243 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF639Q9UID6 485 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 PCDHGB5Q9Y5G0 923 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF142P52746 1687 aaPredicted RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 A0A0D9SEW6 157 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 METTL21EPA6NDL7 271 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 LRRN3E7EW58 273 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 CCL16O15467 120 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 LCKP06239 509 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 CELP19835 753 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ARHGDIBP52566 201 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 PCBP2Q15366 365 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 KIAA1324Q6UXG2 1013 aaKnown RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 GALNT13Q8IUC8 556 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF676Q8N7Q3 588 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 LRRN3Q9H3W5 708 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 PCDH10Q9P2E7 1040 aa15.38■□□□□ 0.05
COL17A1-202ENST00000369733 INTS6Q9UL03 887 aaKnown RBP15.38■□□□□ 0.05
COL17A1-202ENST00000369733 TRBV23OR9-2A0A075B6M9 112 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 CD68P34810 354 aaPredicted RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 PPM1AP35813 382 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 MLLT10P55197 1068 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF763Q0D2J5 394 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 PAQR7Q86WK9 346 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 PAPD5Q8NDF8 572 aaKnown RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 GRHL3Q8TE85 626 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 RIPOR3Q96MK2 946 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 IL12RB2Q99665 862 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 REEP4Q9H6H4 257 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 RRAGCQ9HB90 399 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 B3GNT3Q9Y2A9 372 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 EEF1E1O43324 174 aaKnown RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 PRMT3O60678 531 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 RCBTB2O95199 551 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 LDOC1O95751 146 aaPredicted RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TACSTD2P09758 323 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 GPX3P22352 226 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 CRISP1P54107 249 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 ZCCHC12Q6PEW1 402 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 DPY19L3Q6ZPD9 716 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 LMLNQ96KR4 655 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TP63Q9H3D4 680 aaPredicted RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 MRPS30Q9NP92 439 aaKnown RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 MKKSQ9NPJ1 570 aaPredicted RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 NUDT15Q9NV35 164 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 UTS2RQ9UKP6 389 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 APOL3O95236 402 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 GPR68Q15743 365 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 RAB12Q6IQ22 244 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 CARM1Q86X55 608 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 COQ8AQ8NI60 647 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 C5orf34Q96MH7 638 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 SRRDQ9UH36 339 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 ALG5Q9Y673 324 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 TIAM2Q8IVF5 1701 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 CSN2P05814 226 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 SELPP16109 830 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 GTF2IRD2BQ6EKJ0 949 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 GPRIN1Q7Z2K8 1008 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 GTF2IRD2Q86UP8 949 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 SDR16C5Q8N3Y7 309 aa15.37■□□□□ 0.05
COL17A1-202ENST00000369733 ZBTB20Q9HC78 741 aaPredicted RBP15.37■□□□□ 0.05
COL17A1-202ENST00000369733 ADAP2Q9NPF8 381 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms