RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 LIX1Q8N485 282 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 KRTCAP2Q8N6L1 136 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 NATD1Q8N6N6 113 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 ZNF740Q8NDX6 193 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 PSMA8Q8TAA3 256 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 HCAR2Q8TDS4 363 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 TMBIM1Q969X1 311 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 MUS81Q96NY9 551 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 PSD2Q9BQI7 771 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 ZCCHC2Q9C0B9 1178 aaKnown RBP10.24□□□□□ -0.77
TPM3-212ENST00000368533 MUC13Q9H3R2 512 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 ADGRE2Q9UHX3 823 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 MAGEL2Q9UJ55 1249 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 TCRBV5S2A0A599 114 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 RGS14O43566 566 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 NOBOXO60393 691 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 CLDN9O95484 217 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 CBSLP0DN79 551 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 CDH1P12830 882 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 FOSL2P15408 326 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 PRKCAP17252 672 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 DDX5P17844 614 aaKnown RBP10.24□□□□□ -0.77
TPM3-212ENST00000368533 HTR1EP28566 365 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 CBSP35520 551 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 ZFP36L2P47974 494 aaKnown RBP10.24□□□□□ -0.77
TPM3-212ENST00000368533 TPMTP51580 245 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 CYBRD1Q53TN4 286 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 SPANXN4Q5MJ08 99 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 SNAP47Q5SQN1 464 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 CACHD1Q5VU97 1274 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 SIGIRRQ6IA17 410 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 LYPD8Q6UX82 237 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 SLCO6A1Q86UG4 719 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 ANKRD46Q86W74 232 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 ZDHHC13Q8IUH4 622 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 PLD3Q8IV08 490 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 ZCCHC7Q8N3Z6 543 aaKnown RBP10.24□□□□□ -0.77
TPM3-212ENST00000368533 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.24□□□□□ -0.77
TPM3-212ENST00000368533 ZNF480Q8WV37 535 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 PDXPQ96GD0 296 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 PPP3R2Q96LZ3 170 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 TSSK3Q96PN8 268 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 RAD18Q9NS91 495 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 VAPAQ9P0L0 249 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 U3KQV3 271 aa10.24□□□□□ -0.77
TPM3-212ENST00000368533 BCAS1O75363 584 aaPredicted RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 AP2A2O94973 939 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 C1orf105O95561 183 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 CST1P01037 141 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 GSTM1P09488 218 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 HNRNPFP52597 415 aaKnown RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 TBPL1P62380 186 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 CYP4F2P78329 520 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 PRAMEF14Q5SWL7 426 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 PTCRAQ6ISU1 281 aaPredicted RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 ENPP6Q6UWR7 440 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 ENPP7Q6UWV6 458 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 SPATC1Q76KD6 591 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 SPRED1Q7Z699 444 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 GATAD2AQ86YP4 633 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 PHACTR4Q8IZ21 702 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 OR13F1Q8NGS4 319 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 SLC13A3Q8WWT9 602 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 NEIL2Q969S2 332 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 EGLN2Q96KS0 407 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 CARS2Q9HA77 564 aaKnown RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 SMURF2Q9HAU4 748 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 FGF22Q9HCT0 170 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 PRDM8Q9NQV8 689 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 DNAJC11Q9NVH1 559 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 MANBAO00462 879 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 DLGAP3O95886 979 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 SPNP16150 400 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 GABRG2P18507 467 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 SERPINB1P30740 379 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 PLA2G16P53816 162 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 RPS21P63220 83 aaKnown RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 PWP1Q13610 501 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 ENPP2Q13822 863 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 GBX1Q14549 363 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 ZNF846Q147U1 533 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 SMU1Q2TAY7 513 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 GTDC1Q4AE62 458 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 FAM180BQ6P0A1 224 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 SPESP1Q6UW49 350 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 DLEU7Q6UYE1 221 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 CCDC81Q6ZN84 652 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 PLEKHG7Q6ZR37 379 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 LRRTM4Q86VH4 590 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 PTRH1Q86Y79 214 aaKnown RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 HS3ST5Q8IZT8 346 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 FAM86B1Q8N7N1 296 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 GOLM1Q8NBJ4 401 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 TP53I13Q8NBR0 393 aaPredicted RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 TFGQ92734 400 aaPredicted RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 RAB7BQ96AH8 199 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 AURKBQ96GD4 344 aaPredicted RBP10.23□□□□□ -0.77
TPM3-212ENST00000368533 APOLD1Q96LR9 279 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 OR52E6Q96RD3 313 aa10.23□□□□□ -0.77
TPM3-212ENST00000368533 C1QTNF3Q9BXJ4 246 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms