RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RPS17P08708 135 aaKnown RBP21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 NR1D1P20393 614 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 HIST2H2ACQ16777 129 aaPredicted RBP21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 HIST2H2AA3Q6FI13 130 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 GAL3ST3Q96A11 431 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 C8orf44Q96CB5 159 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 PEX11GQ96HA9 241 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 FER1L6-AS2Q96M78 137 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 QRFPRQ96P65 431 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 C1QTNF3Q9BXJ4 246 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 MS4A8Q9BY19 250 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 VN1R1Q9GZP7 353 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 DCDC2Q9UHG0 476 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 FBXL4Q9UKA2 621 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 MKL2Q9ULH7 1088 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 TP53TG5Q9Y2B4 290 aa21.19■□□□□ 0.98
ECHDC1-203ENST00000368291 A0A0G2JN53 185 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 ERI3O43414 337 aaKnown RBP21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 HEXBP07686 556 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 KRT15P19012 456 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 PIK3CGP48736 1102 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 FAAH2Q6GMR7 532 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 TCTN3Q6NUS6 607 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 NIPAL1Q6NVV3 410 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 TMEM205Q6UW68 189 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 RNF175Q8N4F7 328 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 MREGQ8N565 214 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 L3MBTL4Q8NA19 623 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 FDCSPQ8NFU4 85 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 OR2L5Q8NG80 312 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 OR52B6Q8NGF0 335 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 UBE2E3Q969T4 207 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 REXO4Q9GZR2 422 aaKnown RBP21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 NOL11Q9H8H0 719 aaKnown RBP21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 ACTR8Q9H981 624 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 ZNF71Q9NQZ8 489 aaPredicted RBP21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 LANCL2Q9NS86 450 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 RNF11Q9Y3C5 154 aa21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 PCDHGA9Q9Y5G4 932 aaKnown RBP21.18■□□□□ 0.98
ECHDC1-203ENST00000368291 A0A1W2PQ72 361 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 DLX3O60479 287 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 UGDHO60701 494 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 BTN3A2P78410 334 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 NFATC3Q12968 1075 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 TRAF3Q13114 568 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 TUBB8Q3ZCM7 444 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 ABHD17CQ6PCB6 329 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 ZNF483Q8TF39 744 aaPredicted RBP21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 CDK15Q96Q40 435 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 OR1F2PQ96R84 312 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 F2RL3Q96RI0 385 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 NTMT1Q9BV86 223 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 NUDT9Q9BW91 350 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 RBCK1Q9BYM8 510 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 CLK4Q9HAZ1 481 aaKnown RBP21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 TSC22D4Q9Y3Q8 395 aa21.17■□□□□ 0.98
ECHDC1-203ENST00000368291 LOC102723996A0A087X1L8 192 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 A0A1B0GTL3 188 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 TLDC2A0PJX2 215 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 A6NL46 340 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 PPP6CO00743 305 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 GLRA3O75311 464 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 PCNAP12004 261 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 ACPPP15309 386 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 PLA2G16P53816 162 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 SOX8P57073 446 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 SKP1P63208 163 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 UBE3DQ7Z6J8 389 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 MYLK4Q86YV6 388 aaPredicted RBP21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 CLEC1AQ8NC01 280 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 SLC25A23Q9BV35 468 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 ATP13A2Q9NQ11 1180 aa21.16■□□□□ 0.98
ECHDC1-203ENST00000368291 H0YIV9 168 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 TGFB1P01137 390 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 FHP07954 510 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 CYC1P08574 325 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 COX6A1P12074 109 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 TAC1P20366 129 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 IL10P22301 178 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 CCNG1P51959 295 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 CDH13P55290 713 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 HERVK_113P63132 956 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 RHAGQ02094 409 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 SLC18A2Q05940 514 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 Q0VFX4 171 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 RUNX2Q13950 521 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 CPSF6Q16630 551 aaKnown RBP eCLIP21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 MINDY4Q4G0A6 757 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 LACTB2Q53H82 288 aaPredicted RBP21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 LANCL3Q6ZV70 420 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 CA13Q8N1Q1 262 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 RIBC1Q8N443 379 aaPredicted RBP21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 AMER2Q8N7J2 671 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 HUS1BQ8NHY5 278 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 WDR20Q8TBZ3 569 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 TBC1D20Q96BZ9 403 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 TMEM237Q96Q45 408 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 ERVK-6Q9BXR3 956 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 SEMA4BQ9NPR2 832 aaPredicted RBP21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 PRDM7Q9NQW5 492 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms