RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 KIF1CO43896 1103 aaKnown RBP9.04□□□□□ -0.96
VTA1-201ENST00000367621 TMPRSS11DO60235 418 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 PCDH7O60245 1069 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 PRMT3O60678 531 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 EPN2O95208 641 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 LRATO95237 230 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 B3GALT4O96024 378 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 GBAP04062 536 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 CFIP05156 583 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 KLK1P06870 262 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 CTSBP07858 339 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SMIM10L1P0DMW3 83 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 ST6GAL1P15907 406 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 PCSK2P16519 638 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 HOXB9P17482 250 aaPredicted RBP9.04□□□□□ -0.96
VTA1-201ENST00000367621 GRK3P35626 688 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 PGM1P36871 562 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 GABRA4P48169 554 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 NUDT2P50583 147 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 RAP1GDS1P52306 607 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 EPHA4P54764 986 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 OR1D5P58170 312 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 PSME3P61289 254 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 RPS15AP62244 130 aaKnown RBP9.04□□□□□ -0.96
VTA1-201ENST00000367621 PHEXP78562 749 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 CYP4F3Q08477 520 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 DNAL1Q4LDG9 190 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 TIGD2Q4W5G0 525 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 TMEM35AQ53FP2 167 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 TRIM61Q5EBN2 209 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SPANXN4Q5MJ08 99 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 NKAIN2Q5VXU1 208 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 FRMPD2BQ6IN97 320 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 FAM71E1Q6IPT2 247 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 ABHD17CQ6PCB6 329 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SLC2A7Q6PXP3 512 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 ZNF793Q6ZN11 406 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 PRR23BQ6ZRT6 265 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 DGLUCYQ7Z3D6 616 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 DEFB107AQ8IZN7 70 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 OR4N4Q8N0Y3 316 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 MMP21Q8N119 569 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 VWA5B2Q8N398 1253 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 ARHGEF39Q8N4T4 335 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 DNAJC22Q8N4W6 341 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 GLB1L3Q8NCI6 653 aaPredicted RBP9.04□□□□□ -0.96
VTA1-201ENST00000367621 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 TRPV3Q8NET8 790 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 OR4C6Q8NH72 309 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 C16orf78Q8WTQ4 265 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 TM4SF18Q96CE8 201 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 MS4A6EQ96DS6 147 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SMIM10Q96HG1 83 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SLC38A3Q99624 504 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 DPY30Q9C005 99 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SEMA6CQ9H3T2 930 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SMOC1Q9H4F8 434 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 DDX31Q9H8H2 851 aaKnown RBP9.04□□□□□ -0.96
VTA1-201ENST00000367621 FAM60AQ9NP50 221 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SERHLQ9NQF3 203 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 PRDM7Q9NQW5 492 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.04□□□□□ -0.96
VTA1-201ENST00000367621 SEMA5BQ9P283 1151 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 CDV3Q9UKY7 258 aaKnown RBP9.04□□□□□ -0.96
VTA1-201ENST00000367621 PADI4Q9UM07 663 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 R4GN57 208 aa9.04□□□□□ -0.96
VTA1-201ENST00000367621 DMDP11532 3685 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
VTA1-201ENST00000367621 SDK1Q7Z5N4 2213 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 A0A0A6YYD5 115 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 A0A0J9YVX5 310 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 DYTNA2CJ06 578 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 CCDC154A6NI56 674 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 SLC9B1P1A6NJY1 282 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 GABRR3A8MPY1 467 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 RHPN2P1A8MT19 583 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 A8MUI8 341 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 H0YGG7 62 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 SCAMP2O15127 329 aaKnown RBP9.03□□□□□ -0.96
VTA1-201ENST00000367621 AKAP10O43572 662 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 SIGLEC6O43699 453 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 DFNA5O60443 496 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 RASSF9O75901 435 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 MYO1DO94832 1006 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 SORBS2O94875 1100 aaKnown RBP9.03□□□□□ -0.96
VTA1-201ENST00000367621 SCELO95171 688 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 IL6P05231 212 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 LAMP1P11279 417 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 PIM1P11309 404 aaPredicted RBP9.03□□□□□ -0.96
VTA1-201ENST00000367621 GLB1P16278 677 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 PRPS1L1P21108 318 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 CD1CP29017 333 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 PTPN6P29350 595 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 GPR3P46089 330 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 ARFIP1P53367 373 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 CLNS1AP54105 237 aaKnown RBP9.03□□□□□ -0.96
VTA1-201ENST00000367621 GFERP55789 205 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 KCNK10P57789 538 aa9.03□□□□□ -0.96
VTA1-201ENST00000367621 ARF3P61204 181 aaPredicted RBP9.03□□□□□ -0.96
VTA1-201ENST00000367621 ELF3P78545 371 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms