RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 LSRQ86X29 649 aaPredicted RBP13.05□□□□□ -0.32
PRKN-205ENST00000366897 NFKBIDQ8NI38 313 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 ASB15Q8WXK1 588 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 TMEM203Q969S6 136 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 COQ8BQ96D53 544 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 HIST1H2AHQ96KK5 128 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 HIST1H2AJQ99878 128 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 H2AFJQ9BTM1 129 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 CCDC177Q9NQR7 707 aaPredicted RBP13.05□□□□□ -0.32
PRKN-205ENST00000366897 PLCXD1Q9NUJ7 323 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 GPATCH2Q9NW75 528 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 KCTD5Q9NXV2 234 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 FAM172BPA6NC97 362 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 E7EQ34 232 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 SAP18O00422 153 aaKnown RBP13.05□□□□□ -0.32
PRKN-205ENST00000366897 SLITRK5O94991 958 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 LIMK1P53667 647 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 SRSF11Q05519 484 aaKnown RBP13.05□□□□□ -0.32
PRKN-205ENST00000366897 BCL2L1Q07817 233 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 STARD3Q14849 445 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 ZNF79Q15937 498 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 DGKKQ5KSL6 1271 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 LHX8Q68G74 356 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 PTCHD4Q6ZW05 846 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 OR4A15Q8NGL6 344 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 UBASH3BQ8TF42 649 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 MED8Q96G25 268 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 HHIPQ96QV1 700 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 VPS29Q9UBQ0 182 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 CFL2Q9Y281 166 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 MAP4K5Q9Y4K4 846 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 A3GALT2U3KPV4 340 aa13.05□□□□□ -0.32
PRKN-205ENST00000366897 GNG14A0A1W2PPG7 69 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 MEIOCA2RUB1 952 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 ZNF840PA6NDX5 716 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 CYBAP13498 195 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 PRKCAP17252 672 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 CSNK2BP67870 215 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 HOXC5Q00444 222 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 MC1RQ01726 317 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 GPR17Q13304 367 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 MBTPS1Q14703 1052 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 CCSMST1Q4G0I0 132 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 ZNF385BQ569K4 471 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 IER5LQ5T953 404 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 CPTPQ5TA50 214 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 MFSD4BQ5TF39 518 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 RAB43Q86YS6 212 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 AQP11Q8NBQ7 271 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 CSGALNACT1Q8TDX6 532 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 SAMD11Q96NU1 681 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 VPS35Q96QK1 796 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 SLC22A12Q96S37 553 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 HTATIP2Q9BUP3 242 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 RDH14Q9HBH5 336 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 DNAJC11Q9NVH1 559 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 RFXAPO00287 272 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 CAPN5O15484 640 aaPredicted RBP13.04□□□□□ -0.32
PRKN-205ENST00000366897 ANXA4P09525 319 aaPredicted RBP13.04□□□□□ -0.32
PRKN-205ENST00000366897 SPAM1P38567 509 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 SELENOWP63302 87 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 CDH18Q13634 790 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 KCNA10Q16322 511 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 FBXO43Q4G163 708 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 UBE2Q1Q7Z7E8 422 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 ABI3BPQ7Z7G0 1075 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 GLCCI1Q86VQ1 547 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 SLC34A3Q8N130 599 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 PGBD3Q8N328 593 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 C11orf65Q8NCR3 313 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 CHAC2Q8WUX2 184 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 ASIC4Q96FT7 647 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 OPALINQ96PE5 141 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 HHATLQ9HCP6 504 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 V9GYH0 126 aa13.04□□□□□ -0.32
PRKN-205ENST00000366897 PRAMEF33A0A0G2JMD5 474 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 ADAMDEC1O15204 470 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 PRAMEF10O60809 474 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 ENTPD6O75354 484 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 APOL3O95236 402 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CLEC2LP0C7M8 214 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 IL7P13232 177 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 PLD1Q13393 1074 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 VEZF1Q14119 521 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CDK10Q15131 360 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 MICAQ29983 383 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 SLX4IPQ5VYV7 408 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 TMPRSS11AQ6ZMR5 421 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CADM2Q8N3J6 435 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CELF5Q8N6W0 485 aaKnown RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 PIK3R3Q92569 461 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CIDECQ96AQ7 238 aaPredicted RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 PKP4Q99569 1192 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 RAD9AQ99638 391 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CHST8Q9H2A9 424 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 ZNF556Q9HAH1 456 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms