RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 ACSM2AQ08AH3 577 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 VAC14Q08AM6 782 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 CLN3Q13286 438 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 TRA2AQ13595 282 aaKnown RBP eCLIP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 PWP1Q13610 501 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 TERF2Q15554 542 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ZIC1Q15915 447 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SMU1Q2TAY7 513 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 LSM12Q3MHD2 195 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 TMEM35AQ53FP2 167 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SNAP47Q5SQN1 464 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 TMTC4Q5T4D3 741 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 FAM219BQ5XKK7 198 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ACSM2BQ68CK6 577 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ADNP2Q6IQ32 1131 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 OGFOD2Q6N063 350 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 USP53Q70EK8 1073 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 CHSY3Q70JA7 882 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 VN1R5Q7Z5H4 357 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SPATA19Q7Z5L4 167 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 VASH2Q86V25 355 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ZFAND4Q86XD8 727 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 PLD3Q8IV08 490 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 PARP9Q8IXQ6 854 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 CSNK1A1LQ8N752 337 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ANKRD53Q8N9V6 530 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 FNDC5Q8NAU1 212 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 CAMKVQ8NCB2 501 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SRFBP1Q8NEF9 429 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 OR2T11Q8NH01 316 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 EXTL1Q92935 676 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 METTL2AQ96IZ6 378 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 CCDC74BQ96LY2 380 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 C3orf30Q96M34 536 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SLC46A1Q96NT5 459 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 OR52B2Q96RD2 323 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 MS4A8Q9BY19 250 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 REXO4Q9GZR2 422 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 CHRNA10Q9GZZ6 450 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ZNF768Q9H5H4 540 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 WDR55Q9H6Y2 383 aaPredicted RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 AKTIPQ9H8T0 292 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 POLR1BQ9H9Y6 1135 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 LRTM1Q9HBL6 345 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 C1orf109Q9NX04 203 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 AHSPQ9NZD4 102 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 NOP53Q9NZM5 478 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 TMEM9Q9P0T7 183 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SEMA5BQ9P283 1151 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 PILRAQ9UKJ1 303 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 ATXN7L1Q9ULK2 861 aaPredicted RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 POLR3HQ9Y535 204 aaPredicted RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 AP1M2Q9Y6Q5 423 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 HEATR5BQ9P2D3 2071 aa6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 SNRNP200O75643 2136 aaKnown RBP6.46□□□□□ -1.38
RNU1-55P-201ENST00000365510 PCM1Q15154 2024 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 SPTA1P02549 2419 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 A0A088AWK7 358 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 IGHV5-51A0A0C4DH38 117 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 IGHV5-10-1A0A0J9YXX1 117 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 ARHGAP10A1A4S6 786 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 H0YGG7 62 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 ERVH48-1M5A8F1 160 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 NTN3O00634 580 aaPredicted RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 UBDO15205 165 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 RRP9O43818 475 aaKnown RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 KIF1CO43896 1103 aaKnown RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 LCMT2O60294 686 aaKnown RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 SRPX2O60687 465 aaPredicted RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 PRAMEF10O60809 474 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 PEX11AO75192 247 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 SEC22BO75396 215 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 WISP1O95388 367 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 TGFB1P01137 390 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 EIF2S1P05198 315 aaKnown RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 FAM87AP0C7U9 286 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 CDK4P11802 303 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 IDO1P14902 403 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 PCSK2P16519 638 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 NELFEP18615 380 aaKnown RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 NCF2P19878 526 aaPredicted RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 ZNF10P21506 573 aaPredicted RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 ETV5P41161 510 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 SEPHS1P49903 392 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 PDX1P52945 283 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 ARFIP1P53367 373 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 PCBP4P57723 403 aaKnown RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 TMPRSS3P57727 454 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 VSX2P58304 361 aaPredicted RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 ARF3P61204 181 aaPredicted RBP6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 SKP1P63208 163 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 EMX2Q04743 252 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 CUL3Q13618 768 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 SQLEQ14534 574 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 RPS6KA2Q15349 733 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 GSTA3Q16772 222 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 AP5B1Q2VPB7 878 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 DEFB110Q30KQ9 67 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 TCTE1Q5JU00 501 aa6.45□□□□□ -1.38
RNU1-55P-201ENST00000365510 C6orf136Q5SQH8 315 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms