RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 GAL3ST3Q96A11 431 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 RGMAQ96B86 450 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 METTL2AQ96IZ6 378 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 C10orf90Q96M02 699 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 CTRCQ99895 268 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 ZPBPQ9BS86 351 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 DDA1Q9BW61 102 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 B3GNT4Q9C0J1 378 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 PRDM7Q9NQW5 492 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 IRAK4Q9NWZ3 460 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 SATB2Q9UPW6 733 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 MRPS2Q9Y399 296 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 PCDHB3Q9Y5E6 796 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 PCDHGA3Q9Y5H0 932 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 SEC16AO15027 2179 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 C4orf51C9J302 202 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 SDHDO14521 159 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 SHOX2O60902 331 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 TIAF1O95411 115 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 TGM3Q08188 693 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 KIAA0040Q15053 153 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 IMPG1Q17R60 797 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 MUM1Q2TAK8 710 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 C3orf38Q5JPI3 329 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 DCAF12Q5T6F0 453 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 VWA5B1Q5TIE3 1220 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 ABHD13Q7L211 337 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 METTL4Q8N3J2 472 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 PMEPA1Q969W9 287 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 C11orf24Q96F05 449 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 MAELQ96JY0 434 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 QRFPRQ96P65 431 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 SIKE1Q9BRV8 207 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 CENPKQ9BS16 269 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 TBCDQ9BTW9 1192 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 ZNF717Q9BY31 904 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 TRIM55Q9BYV6 548 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 ASPSCR1Q9BZE9 553 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 POLR1BQ9H9Y6 1135 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 KCNK13Q9HB14 408 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 PRM3Q9NNZ6 103 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 LHX9Q9NQ69 397 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 CUTCQ9NTM9 273 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 RIC8BQ9NVN3 520 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 SIRT5Q9NXA8 310 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 AHSPQ9NZD4 102 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 PISDQ9UG56 409 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 SRPK3Q9UPE1 567 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 MSRB2Q9Y3D2 182 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 ATP6AP2A0A1C7CYW4 349 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 SAP18O00422 153 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 PLPP1O14494 284 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 LSM1O15116 133 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 ERI3O43414 337 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 FOXS1O43638 330 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 VPS4BO75351 444 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 SCRG1O75711 98 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 ATP6AP2O75787 350 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 HBQ1P09105 142 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 PRR35P0CG20 571 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 ZNF888P0CJ79 500 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 ALOX12P18054 663 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 DRD4P21917 467 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 BSGP35613 385 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 TSFMP43897 325 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 IDH3AP50213 366 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 MAPK10P53779 464 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 PLA2G16P53816 162 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 AQP5P55064 265 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 RAB8AP61006 207 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 CAMK2BQ13554 666 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 HERC3Q15034 1050 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 OR4C11Q6IEV9 310 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 RHBDD2Q6NTF9 364 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 TRIM40Q6P9F5 258 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 TMEM126BQ8IUX1 230 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 RFWD2Q8NHY2 731 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 STON2Q8WXE9 905 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 APIPQ96GX9 242 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 PPP3R2Q96LZ3 170 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 KCNC2Q96PR1 638 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 TEFMQ96QE5 360 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 NDC1Q9BTX1 674 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 MRPL1Q9BYD6 325 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 WDR55Q9H6Y2 383 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 DDX31Q9H8H2 851 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 AKTIPQ9H8T0 292 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 LRTM1Q9HBL6 345 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 NPHS2Q9NP85 383 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 C1orf109Q9NX04 203 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 B3GALT1Q9Y5Z6 326 aa11.78□□□□□ -0.52
NIF3L1-201ENST00000359683 CHD6Q8TD26 2715 aa11.77□□□□□ -0.52
NIF3L1-201ENST00000359683 AKAP13Q12802 2813 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 C9orf172C9J069 976 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 RTCAO00442 366 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 DSCR3O14972 297 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 PEX11AO75192 247 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms