RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CLDN11O75508 207 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 RPS17P08708 135 aaKnown RBP9.46□□□□□ -0.89
CHD3-202ENST00000358181 CCND3P30281 292 aaPredicted RBP9.46□□□□□ -0.89
CHD3-202ENST00000358181 SLC5A3P53794 718 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 WNT3AP56704 352 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 RAB8AP61006 207 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 LRIF1Q5T3J3 769 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 CDKAL1Q5VV42 579 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 FAM180BQ6P0A1 224 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 STEAP2Q8NFT2 490 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 DPH3Q96FX2 82 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 PCBD2Q9H0N5 130 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 PCDHB16Q9NRJ7 776 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.46□□□□□ -0.89
CHD3-202ENST00000358181 TP53TG5Q9Y2B4 290 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 OR6C75A6NL08 312 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 SLC38A8A6NNN8 435 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 FGF1P05230 155 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 F7P08709 466 aaPredicted RBP9.46□□□□□ -0.9
CHD3-202ENST00000358181 GZMAP12544 262 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 CLCN4P51793 760 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 CLCNKBP51801 687 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 MCL1Q07820 350 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 MYBPHQ13203 477 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 KYAT3Q6YP21 454 aaKnown RBP9.46□□□□□ -0.9
CHD3-202ENST00000358181 ERI1Q8IV48 349 aaKnown RBP9.46□□□□□ -0.9
CHD3-202ENST00000358181 PIAS4Q8N2W9 510 aaPredicted RBP9.46□□□□□ -0.9
CHD3-202ENST00000358181 FAM86B1Q8N7N1 296 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 CAMKVQ8NCB2 501 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 MALSU1Q96EH3 234 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 ZNF670Q9BS34 389 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 OR2S2Q9NQN1 319 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 SNX15Q9NRS6 342 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 TMEM9Q9P0T7 183 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 PLSCR5A0PG75 271 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 FAM149AA5PLN7 773 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 SLC15A5A6NIM6 579 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 H3BML4 177 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 LILRB3O75022 631 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 PRKD3O94806 890 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 ERBB2P04626 1255 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 GRIN2CQ14957 1233 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 IQCF1Q8N6M8 205 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 LNX1Q8TBB1 728 aaPredicted RBP9.46□□□□□ -0.9
CHD3-202ENST00000358181 ZNF566Q969W8 418 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 HEXAP06865 529 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 ARAFP10398 606 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 RBMXP38159 391 aaKnown RBP9.46□□□□□ -0.9
CHD3-202ENST00000358181 PREPP48147 710 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 FOLH1Q04609 750 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 SLC18A2Q05940 514 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 ZNF460Q14592 562 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 CDNFQ49AH0 187 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 FAM47BQ8NA70 645 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 NXNL1Q96CM4 212 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 ZBED6CLQ96FA7 236 aaPredicted RBP9.46□□□□□ -0.9
CHD3-202ENST00000358181 NAA11Q9BSU3 229 aaPredicted RBP9.46□□□□□ -0.9
CHD3-202ENST00000358181 HSFX1Q9UBD0 423 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 STXBP5LQ9Y2K9 1186 aa9.46□□□□□ -0.9
CHD3-202ENST00000358181 CYB5BO43169 146 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 PSMG1O95456 288 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 EDNRBP24530 442 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 PSMA6P60900 246 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 C6orf52Q5T4I8 152 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 UNQ6126/PRO20091Q6UXV3 157 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 VGLL2Q8N8G2 317 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 GLYATL1Q969I3 302 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 DPEP3Q9H4B8 488 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 ARNT2Q9HBZ2 717 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 HMGXB4Q9UGU5 601 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 REREQ9P2R6 1566 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 CDK2AP1O14519 115 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 TP53I11O14683 189 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 PAHP00439 452 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 PAEPP09466 180 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 ACADVLP49748 655 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 RTP1P59025 263 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 CRB2Q5IJ48 1285 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 MANEAQ5SRI9 462 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 RBMS3Q6XE24 437 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 SCCPDHQ8NBX0 429 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 CREB3L1Q96BA8 519 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 SORCS3Q9UPU3 1222 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 RNF215Q9Y6U7 377 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 DNM1LO00429 736 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 RRP8O43159 456 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 XRCC1P18887 633 aaPredicted RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 THBS2P35442 1172 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 CD79BP40259 229 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 CRISP3P54108 245 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 CMC1Q7Z7K0 106 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 MARCH9Q86YJ5 346 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 NPAS4Q8IUM7 802 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 OR10A6Q8NH74 314 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 PPP1R35Q8TAP8 253 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 DENND1AQ8TEH3 1009 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 HSPA12BQ96MM6 686 aa9.45□□□□□ -0.9
CHD3-202ENST00000358181 POLDIP3Q9BY77 421 aaKnown RBP9.45□□□□□ -0.9
CHD3-202ENST00000358181 VWA7Q9Y334 891 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms