RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 ZNF621Q6ZSS3 439 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 TRIM48Q8IWZ4 208 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 OR7D4Q8NG98 312 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 NACC2Q96BF6 587 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 VPS35Q96QK1 796 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 SLC32A1Q9H598 525 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 RETREG1Q9H6L5 497 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 SNTG1Q9NSN8 517 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 FZD4Q9ULV1 537 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 VPS4AQ9UN37 437 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 PCDHGC4Q9Y5F7 938 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 PRSS21Q9Y6M0 314 aa11.64□□□□□ -0.55
SMARCAL1-201ENST00000357276 PSMA1P25786 263 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 GPC1P35052 558 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 TM4SF4P48230 202 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 CDC42P60953 191 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZNF628Q5EBL2 1059 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 MEDAGQ5VYS4 303 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 FAM131AQ6UXB0 335 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 HSDL2Q6YN16 418 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 SLC44A2Q8IWA5 706 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 BBS7Q8IWZ6 715 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 CLECL1Q8IZS7 167 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 C11orf24Q96F05 449 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 EXOC2Q96KP1 924 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 BOCQ9BWV1 1114 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 APOL5Q9BWW9 433 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 ADGRE3Q9BY15 652 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 UCK2Q9BZX2 261 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 LATS2Q9NRM7 1088 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 NOS1APO75052 506 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 HBQ1P09105 142 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 TACR2P21452 398 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 SNRPGP62308 76 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 DSC3Q14574 896 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 QPRTQ15274 297 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 RGNQ15493 299 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 TEAD4Q15561 434 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 MBOAT1Q6ZNC8 495 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 TMC8Q8IU68 726 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZNF557Q8N988 423 aaPredicted RBP11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 IL17RCQ8NAC3 791 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 ACER3Q9NUN7 267 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 TMEM39AQ9NV64 488 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 ST3GAL5Q9UNP4 418 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 ALG5Q9Y673 324 aa11.63□□□□□ -0.55
SMARCAL1-201ENST00000357276 TRBV5-4A0A0C4DH59 114 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 LINC00862A6NCI5 91 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 TEX28O15482 410 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 ARHGEF9O43307 516 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 FZD6O60353 706 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 TMCC2O75069 709 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 OR2B3O76000 313 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZNF7P17097 686 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 HMGCLP35914 325 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 GPR15P49685 360 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 MVDP53602 400 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 RUNX1T1Q06455 604 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 DMC1Q14565 340 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 SPHARQ15513 63 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 SDHAF4Q5VUM1 108 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 PTRHD1Q6GMV3 140 aaKnown RBP11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZNF770Q6IQ21 691 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 GRAMD2AQ8IUY3 354 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 FBXL6Q8N531 539 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZBTB2Q8N680 514 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 OR9Q2Q8NGE9 314 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 UBASH3BQ8TF42 649 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 APOLD1Q96LR9 279 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 MED18Q9BUE0 208 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 CLN6Q9NWW5 311 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 CLEC2DQ9UHP7 191 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 BTNL2Q9UIR0 455 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 NUP50Q9UKX7 468 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 SPEF1Q9Y4P9 236 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 SLC25A14O95258 325 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 CSF2P04141 144 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 GSTM1P09488 218 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 OR4Q2P0C623 313 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 CDH12P55289 794 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 MAP2K5Q13163 448 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 NCF4Q15080 339 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 BTBD16Q32M84 506 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 TOR2AQ5JU69 321 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZNF648Q5T619 568 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 SERPINA9Q86WD7 417 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 SCN4BQ8IWT1 228 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 NANOGP1Q8N7R0 232 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 HASPINQ8TF76 798 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 MAL2Q969L2 176 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 TINF2Q9BSI4 451 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 MARCH2Q9P0N8 246 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 ENOPH1Q9UHY7 261 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 CORO2BQ9UQ03 480 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 PIKFYVEQ9Y2I7 2098 aa11.62□□□□□ -0.55
SMARCAL1-201ENST00000357276 LINC00854A0A1B0GVQ3 168 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms