RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 AFAP1L2Q8N4X5 818 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 AGBL5Q8NDL9 886 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 SIMC1Q8NDZ2 872 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 C7orf26Q96N11 449 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 CSF3RQ99062 836 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 CD180Q99467 661 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 AIF1LQ9BQI0 150 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 RTKNQ9BST9 563 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 EFCAB11Q9BUY7 163 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 C1orf50Q9BV19 199 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 YIPF2Q9BWQ6 316 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 EBPLQ9BY08 206 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 RBCK1Q9BYM8 510 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 REXO4Q9GZR2 422 aaKnown RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 FAM107BQ9H098 131 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 EPB41L1Q9H4G0 881 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 YY1AP1Q9H869 796 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 KCMF1Q9P0J7 381 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 ANKMY1Q9P2S6 941 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 TRPS1Q9UHF7 1281 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 G3BP2Q9UN86 482 aaKnown RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 SLC12A4Q9UP95 1085 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 APOBEC2Q9Y235 224 aaKnown RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 NAALAD2Q9Y3Q0 740 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 ATG4BQ9Y4P1 393 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 POLR3HQ9Y535 204 aaPredicted RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 PCDHGA11Q9Y5H2 935 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 CLDN16Q9Y5I7 305 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 ADGRG4Q8IZF6 3080 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 HYKKA2RU49 373 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 FITM1A5D6W6 292 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 ZNF839A8K0R7 811 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 TMEM114B3SHH9 223 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 HGSO14964 777 aaPredicted RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 POLR1CO15160 346 aaPredicted RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 PGRMC2O15173 223 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 EFSO43281 561 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 ERI3O43414 337 aaKnown RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 CDC123O75794 336 aaPredicted RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 KIAA0754O94854 1291 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 CAPNS1P04632 268 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 KLK1P06870 262 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 DRD4P21917 467 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 RORAP35398 523 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 PKNOX1P55347 436 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 BTN3A2P78410 334 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 PTGR1Q14914 329 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 C6orf136Q5SQH8 315 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 KHDRBS2Q5VWX1 349 aaKnown RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 C18orf63Q68DL7 685 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 COX15Q7KZN9 410 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 ASPGQ86U10 573 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 TMPRSS12Q86WS5 348 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 C1orf52Q8N6N3 182 aaKnown RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 CLHC1Q8NHS4 586 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.82□□□□□ -1.8
LIG4-201ENST00000356922 CHTF18Q8WVB6 975 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 QRFPRQ96P65 431 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 GBP5Q96PP8 586 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 CMKLR1Q99788 373 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 TRMOQ9BU70 441 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 CAPS2Q9BXY5 557 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 CHRNA10Q9GZZ6 450 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 ELOVL6Q9H5J4 265 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 TEX10Q9NXF1 929 aaPredicted RBP3.82□□□□□ -1.8
LIG4-201ENST00000356922 SLC39A1Q9NY26 324 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 PLCL2Q9UPR0 1127 aa3.82□□□□□ -1.8
LIG4-201ENST00000356922 ANKDD1BA6NHY2 528 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 ZSCAN9O15535 394 aaPredicted RBP3.81□□□□□ -1.8
LIG4-201ENST00000356922 BRINP1O60477 761 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 UGDHO60701 494 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 RDH16O75452 317 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 SCRG1O75711 98 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 VIMP08670 466 aaKnown RBP3.81□□□□□ -1.8
LIG4-201ENST00000356922 MSL3P1P0C860 447 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 PRR35P0CG20 571 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 FGF5P12034 268 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 SLC5A2P31639 672 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 GRK3P35626 688 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 AHRP35869 848 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 ZFP36L2P47974 494 aaKnown RBP3.81□□□□□ -1.8
LIG4-201ENST00000356922 NME5P56597 212 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 RPS15AP62244 130 aaKnown RBP3.81□□□□□ -1.8
LIG4-201ENST00000356922 RPS18P62269 152 aaKnown RBP3.81□□□□□ -1.8
LIG4-201ENST00000356922 GABREP78334 506 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 BTG2P78543 158 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 RELAQ04206 551 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 DUSP2Q05923 314 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 LSM12Q3MHD2 195 aaKnown RBP3.81□□□□□ -1.8
LIG4-201ENST00000356922 GALNTL6Q49A17 601 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 TOR1AIP1Q5JTV8 583 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 ANKRD26P1Q6NSI1 321 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 EPGNQ6UW88 154 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 ZNF517Q6ZMY9 492 aaPredicted RBP3.81□□□□□ -1.8
LIG4-201ENST00000356922 COMMD6Q7Z4G1 85 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 CLNKQ7Z7G1 428 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 DDIASQ8IXT1 998 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 PRSS58Q8IYP2 241 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 TBC1D19Q8N5T2 526 aa3.81□□□□□ -1.8
LIG4-201ENST00000356922 KRTCAP2Q8N6L1 136 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms