RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 LYNP07948 512 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 FOSL2P15408 326 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 TNFRSF4P43489 277 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 HYAL2Q12891 473 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 PDK3Q15120 406 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 DEFB133Q30KQ1 61 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 UBE2FQ969M7 185 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 CXorf40BQ96DE9 158 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 ELOVL7A1L3X0 281 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 SOBPA7XYQ1 873 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 TIA1P31483 386 aaKnown RBP eCLIP13.25□□□□□ -0.297e-7■■□□□ 12.6
LSS-201ENST00000356396 MED21Q13503 144 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 LTB4RQ15722 352 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 DEFB134Q4QY38 66 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 RUNDC3AQ59EK9 446 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 OGFRL1Q5TC84 451 aaPredicted RBP13.25□□□□□ -0.29
LSS-201ENST00000356396 CCDC116Q8IYX3 515 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 OR2M4Q96R27 311 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 SLC29A3Q9BZD2 475 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 MRPS30Q9NP92 439 aaKnown RBP13.25□□□□□ -0.29
LSS-201ENST00000356396 SH3GLB1Q9Y371 365 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 BBIP1A8MTZ0 92 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 SLC22A2O15244 555 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 PI15O43692 258 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 CTSVO60911 334 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 EIF2DP41214 584 aaKnown RBP13.25□□□□□ -0.29
LSS-201ENST00000356396 SSR2P43308 183 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 MAPK12P53778 367 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 SRP54P61011 504 aaKnown RBP13.25□□□□□ -0.29
LSS-201ENST00000356396 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.295e-13■□□□□ 11
LSS-201ENST00000356396 KLC1Q07866 573 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 GANABQ14697 944 aaKnown RBP13.25□□□□□ -0.29
LSS-201ENST00000356396 UBE3DQ7Z6J8 389 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 NRROSQ86YC3 692 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 CHTF18Q8WVB6 975 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 ACTR3BQ9P1U1 418 aa13.25□□□□□ -0.29
LSS-201ENST00000356396 H0YIV9 168 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 CREG1O75629 220 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 PRSS23O95084 383 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 CHRNB1P11230 501 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 BCKDHBP21953 392 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 CDK9P50750 372 aaKnown RBP13.24□□□□□ -0.29
LSS-201ENST00000356396 FOXB2Q5VYV0 432 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 CAPRIN2Q6IMN6 1127 aaKnown RBP13.24□□□□□ -0.29
LSS-201ENST00000356396 AAGABQ6PD74 315 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 ZC3H14Q6PJT7 736 aaKnown RBP13.24□□□□□ -0.29
LSS-201ENST00000356396 TRIM48Q8IWZ4 208 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 NLGN4XQ8N0W4 816 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 TCAIMQ8N3R3 496 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 FAM47BQ8NA70 645 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 TSTD1Q8NFU3 115 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 KAT2AQ92830 837 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 TMBIM1Q969X1 311 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 RSPO3Q9BXY4 272 aaPredicted RBP13.24□□□□□ -0.29
LSS-201ENST00000356396 CD320Q9NPF0 282 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 EVA1BQ9NVM1 165 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 ANAPC2Q9UJX6 822 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 ATG4BQ9Y4P1 393 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 HEMK1Q9Y5R4 338 aaPredicted RBP13.24□□□□□ -0.29
LSS-201ENST00000356396 C15orf38-AP3S2A0A0A6YYH1 394 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 SCAMP2O15127 329 aaKnown RBP13.24□□□□□ -0.29
LSS-201ENST00000356396 SLC16A5O15375 505 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 P2RX6O15547 441 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 HYAL3O43820 417 aaPredicted RBP13.24□□□□□ -0.29
LSS-201ENST00000356396 B4GALT2O60909 372 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 CST1P01037 141 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 HNRNPA2B1P22626 353 aaKnown RBP13.24□□□□□ -0.29
LSS-201ENST00000356396 SLC7A1P30825 629 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 ARPINQ7Z6K5 226 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 RASGRP3Q8IV61 690 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 DEFB123Q8N688 67 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 RAD18Q9NS91 495 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 UCKL1Q9NWZ5 548 aa13.24□□□□□ -0.29
LSS-201ENST00000356396 FRS3O43559 492 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 E2F6O75461 281 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 WNT1P04628 370 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 IL6P05231 212 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 UQCRBP14927 111 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 SIM1P81133 766 aaPredicted RBP13.23□□□□□ -0.29
LSS-201ENST00000356396 VLDLRP98155 873 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 HIST2H2ACQ16777 129 aaPredicted RBP13.23□□□□□ -0.29
LSS-201ENST00000356396 HIST2H2AA3Q6FI13 130 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 NFKBIDQ8NI38 313 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 SLC37A2Q8TED4 501 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 SLC35A5Q9BS91 424 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 ZNF717Q9BY31 904 aaPredicted RBP13.23□□□□□ -0.29
LSS-201ENST00000356396 SRMSQ9H3Y6 488 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 CXorf36Q9H7Y0 433 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 NTN4Q9HB63 628 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 TMEM184CQ9NVA4 438 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 MMP17Q9ULZ9 603 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 SLC17A4Q9Y2C5 497 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 LRCH1Q9Y2L9 728 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 ZFHX2Q9C0A1 2572 aaPredicted RBP13.23□□□□□ -0.29
LSS-201ENST00000356396 A8MU76 341 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 QSOX1O00391 747 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 DLGAP1O14490 977 aa13.23□□□□□ -0.29
LSS-201ENST00000356396 MYO1DO94832 1006 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms