RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MYLIPQ8WY64 445 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 ASIC4Q96FT7 647 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 UROC1Q96N76 676 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 ZNF556Q9HAH1 456 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 HHATLQ9HCP6 504 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 RPRD1BQ9NQG5 326 aaKnown RBP9.74□□□□□ -0.85
PTPRA-203ENST00000356147 MAU2Q9Y6X3 613 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 V9GYH0 126 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 A0A0B4J293 547 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 ERVH48-1M5A8F1 160 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CDRT1O95170 752 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CYP17A1P05093 508 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 ASGR1P07306 291 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 HNF4AP41235 474 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 SELENOWP63302 87 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CLPPQ16740 277 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-203ENST00000356147 ERAP2Q6P179 960 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 SYCE2Q6PIF2 218 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 LILRA3Q8N6C8 439 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-203ENST00000356147 SYT14Q8NB59 555 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 OR7G1Q8NGA0 311 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 OR9Q1Q8NGQ5 310 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 PIK3R3Q92569 461 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 TBC1D20Q96BZ9 403 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 RNF31Q96EP0 1072 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CEP295NLQ96MC4 621 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 OPALINQ96PE5 141 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 SLC22A12Q96S37 553 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 VPS29Q9UBQ0 182 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CLEC4EQ9ULY5 219 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CFL2Q9Y281 166 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 OR6C70A6NIJ9 312 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 TMEM88BA6NKF7 163 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 OR2AG2A6NM03 316 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 SCO2O43819 266 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 TPST2O60704 377 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 AP2A2O94973 939 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 C6orf47O95873 294 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CHMP24386 653 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 SOAT1P35610 550 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 PRIM2P49643 509 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 HBA1P69905 142 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CYP4F8P98187 520 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 BCL2L1Q07817 233 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 MTAPQ13126 283 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 E2F2Q14209 437 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 MICAQ29983 383 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 ERICH5Q6P6B1 374 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 OTOP2Q7RTS6 562 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 MMP21Q8N119 569 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 IQCF1Q8N6M8 205 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 C11orf65Q8NCR3 313 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 LINC01599Q8WXQ3 324 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 C11orf54Q9H0W9 315 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-203ENST00000356147 DYRK4Q9NR20 520 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 TMEM202A6NGA9 273 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 H3BN98 237 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 TNFRSF10AO00220 468 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 AKR7A2O43488 359 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CCNB2O95067 398 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 AKR1A1P14550 325 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CYP2A7P20853 494 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 PSMA3P25788 255 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 MAPK1P28482 360 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 HTR2BP41595 481 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 STK19P49842 368 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-203ENST00000356147 DSC1Q08554 894 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 PLD1Q13393 1074 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 NAE1Q13564 534 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CDH18Q13634 790 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 DOC2AQ14183 400 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 NFE2L1Q14494 772 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 RPS26P11Q5JNZ5 115 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-203ENST00000356147 TAGAPQ8N103 731 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 DTX3Q8N9I9 347 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 C7orf57Q8NEG2 295 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 ST13P5Q8NFI4 369 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-203ENST00000356147 PLCXD1Q9NUJ7 323 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 DNAJC11Q9NVH1 559 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 FKBP14Q9NWM8 211 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 CLCA3PQ9Y6N3 262 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 VWA8A3KMH1 1905 aa9.73□□□□□ -0.85
PTPRA-203ENST00000356147 MGAT4DA6NG13 374 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 ADAMDEC1O15204 470 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 TMCC2O75069 709 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 SDHBP21912 280 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 LIMK1P53667 647 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 ARPC4P59998 168 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 MEF2AQ02078 507 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-203ENST00000356147 SRSF11Q05519 484 aaKnown RBP9.72□□□□□ -0.85
PTPRA-203ENST00000356147 SMU1Q2TAY7 513 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 CEP78Q5JTW2 689 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 ADGRF1Q5T601 910 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 SLX4IPQ5VYV7 408 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 TPGS1Q6ZTW0 290 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 RNF130Q86XS8 419 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 NPAS3Q8IXF0 933 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 ZFP41Q8N8Y5 198 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 DNAJB8Q8NHS0 232 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 CSGALNACT1Q8TDX6 532 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms