RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 ZZEF1O43149 2961 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 SCN3AQ9NY46 2000 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 TMEM233B4DJY2 109 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 RTCAO00442 366 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 RDH16O75452 317 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 CRCPO75575 148 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 KLHL18O94889 574 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 SERPINE1P05121 402 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 ALOX12P18054 663 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 PIK3CBP42338 1070 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 NAA20P61599 178 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 OLR1P78380 273 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 BTN3A2P78410 334 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 ADPRMQ3LIE5 342 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 ARHGAP40Q5TG30 622 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 FAM198BQ6UWH4 519 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 COX15Q7KZN9 410 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 ABHD13Q7L211 337 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 UBE3DQ7Z6J8 389 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 AFAP1L2Q8N4X5 818 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 AMER3Q8N944 861 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 OR5T3Q8NGG3 340 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 SELENOMQ8WWX9 145 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 CMTM7Q96FZ5 175 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 SEC16BQ96JE7 1060 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 CNTNAP3BQ96NU0 1288 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 TRMOQ9BU70 441 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 YIPF2Q9BWQ6 316 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 SORBS1Q9BX66 1292 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 CNTNAP3Q9BZ76 1288 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 C20orf27Q9GZN8 174 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 HCN3Q9P1Z3 774 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 CTSFQ9UBX1 484 aa16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 MRPS18BQ9Y676 258 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-202ENST00000355841 ACACBO00763 2458 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 ENO1P06733 434 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 SMIM10L1P0DMW3 83 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 LIFP15018 202 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 SERPINB1P30740 379 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 RPS18P62269 152 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 PPP2R2AP63151 447 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 ABRAXAS2Q15018 415 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 HERC3Q15034 1050 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 KHDRBS2Q5VWX1 349 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 PRMT9Q6P2P2 845 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 SPACA3Q8IXA5 215 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 SMIM10Q96HG1 83 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 MAGEB10Q96LZ2 347 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 SLC29A3Q9BZD2 475 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 ADGRE2Q9UHX3 823 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 TSC22D4Q9Y3Q8 395 aa16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 TPRP12270 2363 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 URB1O60287 2271 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-202ENST00000355841 URADA6NGE7 173 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 H3BQF6 201 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 GALR3O60755 368 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 CNOT3O75175 753 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 ULK1O75385 1050 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 NSA2O95478 260 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 KRT6AP02538 564 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 KRT6BP04259 564 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 CHN1P15882 459 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 WT1P19544 449 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 FBLP22087 321 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 ITPKBP27987 946 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 AVPR1BP47901 424 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 KRT6CP48668 564 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 PHEXP78562 749 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 DNASE1L3Q13609 305 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 SH2D4BQ5SQS7 431 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 DEPDC1Q5TB30 811 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 SHISA6Q6ZSJ9 500 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 CHSY3Q70JA7 882 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 PRSS58Q8IYP2 241 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 ENDOVQ8N8Q3 282 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 OR2L5Q8NG80 312 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 GAL3ST3Q96A11 431 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 MVB12AQ96EY5 273 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 DPH2Q9BQC3 489 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 GPN2Q9H9Y4 310 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 TRPC4Q9UBN4 977 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 ZDHHC2Q9UIJ5 367 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 CDC14AQ9UNH5 594 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 PTGDR2Q9Y5Y4 395 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 FOXE1O00358 373 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 TERTO14746 1132 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 RRP8O43159 456 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 ATP8B1O43520 1251 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 HSPA4LO95757 839 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 NR1D1P20393 614 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 PTX3P26022 381 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 SLC1A6P48664 564 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 ABCE1P61221 599 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 BST1Q10588 318 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 STX3Q13277 289 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 DSG2Q14126 1118 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 NCF4Q15080 339 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 HSP90B2PQ58FF3 399 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 TRIM40Q6P9F5 258 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 ABHD17CQ6PCB6 329 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms