RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 ZNF648Q5T619 568 aaPredicted RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 ASTLQ6HA08 431 aaPredicted RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 SLCO4C1Q6ZQN7 724 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 TMPRSS11BQ86T26 416 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 DDX53Q86TM3 631 aaKnown RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 STX19Q8N4C7 294 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 OR52J3Q8NH60 311 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 GEMIN6Q8WXD5 167 aaKnown RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 FOPNLQ96NB1 174 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 TCF25Q9BQ70 676 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 AMBNQ9NP70 447 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF226Q9NYT6 803 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 FAM32AQ9Y421 112 aaKnown RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 PCM1Q15154 2024 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 SLC5A10A0PJK1 596 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 PLK4O00444 970 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 NPC1O15118 1278 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 DBTP11182 482 aaKnown RBP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 PABPC1P11940 636 aaKnown RBP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 NUDT6P53370 316 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF45Q02386 682 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF284Q2VY69 593 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 TRIM40Q6P9F5 258 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF852Q6ZMS4 543 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 OR4K1Q8NGD4 311 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 NFKBIDQ8NI38 313 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 BTN2A2Q8WVV5 523 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 FOXJ1Q92949 421 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 NEIL2Q969S2 332 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 CRELD1Q96HD1 420 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 NIPSNAP1Q9BPW8 284 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 HEPHQ9BQS7 1158 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 EHD1Q9H4M9 534 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 SPG21Q9NZD8 308 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 GPC6Q9Y625 555 aaPredicted RBP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 ALPK3Q96L96 1907 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 A0A1W2PRU2 124 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 IFNA14P01570 189 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 STSP08842 583 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF8P17098 575 aaPredicted RBP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 S100A5P33763 92 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 OR1E2P47887 323 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 PRIM2P49643 509 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 CTSCP53634 463 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 PRKCDQ05655 676 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 PDE7AQ13946 482 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 TPRG1LQ5T0D9 272 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 PNCKQ6P2M8 343 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 RASGEF1AQ8N9B8 481 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 C9orf43Q8TAL5 461 aaPredicted RBP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 UTP15Q8TED0 518 aaKnown RBP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 VPS35Q96QK1 796 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 CCM2Q9BSQ5 444 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 KLHL25Q9H0H3 589 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 GPBP1L1Q9HC44 474 aaPredicted RBP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPNS3-201ENST00000355530 DUSP12Q9UNI6 340 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 PCDHGA3Q9Y5H0 932 aa17.5■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF197O14709 1029 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 DSCR3O14972 297 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 TBX1O43435 398 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 TLL1O43897 1013 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 C6orf47O95873 294 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 LRG1P02750 347 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 ST3GAL4Q11206 333 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 IRF3Q14653 427 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF630Q2M218 657 aaPredicted RBP17.49■□□□□ 0.39
SPNS3-201ENST00000355530 CRB2Q5IJ48 1285 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF367Q7RTV3 350 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 COMMD6Q7Z4G1 85 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 PPCDCQ96CD2 204 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 PIP5K1AQ99755 562 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 CDADC1Q9BWV3 514 aa17.49■□□□□ 0.39
SPNS3-201ENST00000355530 SMG9Q9H0W8 520 aaKnown RBP17.49■□□□□ 0.39
SPNS3-201ENST00000355530 LOC100506127A0A0U1RQW1 187 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 TSPAN11A1L157 253 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 FOXE1O00358 373 aaPredicted RBP17.48■□□□□ 0.39
SPNS3-201ENST00000355530 PTTG1O95997 202 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 PTHP01270 115 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 FURINP09958 794 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 GJA1P17302 382 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 POLR2EP19388 210 aaKnown RBP17.48■□□□□ 0.39
SPNS3-201ENST00000355530 GRK5P34947 590 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 XCR1P46094 333 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 RGS6P49758 472 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 LIMK1P53667 647 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 TBPL1P62380 186 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 EEF1A2Q05639 463 aaKnown RBP17.48■□□□□ 0.39
SPNS3-201ENST00000355530 SLC13A2Q13183 592 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 ARMCX4Q5H9R4 360 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 TOR1AIP1Q5JTV8 583 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 STEAP3Q658P3 488 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 TMEM25Q86YD3 366 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 LILRA3Q8N6C8 439 aaPredicted RBP17.48■□□□□ 0.39
SPNS3-201ENST00000355530 GLYATL1Q969I3 302 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 WDR34Q96EX3 536 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 EFCAB11Q9BUY7 163 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 C1GALT1Q9NS00 363 aa17.48■□□□□ 0.39
SPNS3-201ENST00000355530 SACM1LQ9NTJ5 587 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms