RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TRPV4Q9HBA0 871 aa12.77□□□□□ -0.37
SCN8A-202ENST00000355133 UCKL1Q9NWZ5 548 aa12.77□□□□□ -0.37
SCN8A-202ENST00000355133 FBXO9Q9UK97 447 aaPredicted RBP12.77□□□□□ -0.37
SCN8A-202ENST00000355133 OR2AT4A6NND4 320 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 VSTM5A8MXK1 200 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 C2orf74A8MZ97 194 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 CAPN5O15484 640 aaPredicted RBP12.76□□□□□ -0.37
SCN8A-202ENST00000355133 ENTPD6O75354 484 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 RPS21P63220 83 aaKnown RBP12.76□□□□□ -0.37
SCN8A-202ENST00000355133 TOMM5Q8N4H5 51 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 KCNJ9Q92806 393 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 TAMM41Q96BW9 452 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 C1orf74Q96LT6 269 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 FAM83CQ9BQN1 747 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 PTGES2Q9H7Z7 377 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 PRTFDC1Q9NRG1 225 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 DNAJC27Q9NZQ0 273 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 AASSQ9UDR5 926 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 SMIM30A4D0T7 59 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 OR6C74A6NCV1 312 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 TTC34A8MYJ7 566 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 TBX10O75333 385 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 WSCD2Q2TBF2 565 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 LINC00471Q8N535 108 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 OR4K14Q8NGD5 310 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 CMKLR1Q99788 373 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 OR2B6P58173 313 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 SLC18A2Q05940 514 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 ABHD18Q0P651 414 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 TAS1R3Q7RTX0 852 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 THAP3Q8WTV1 239 aaPredicted RBP12.76□□□□□ -0.37
SCN8A-202ENST00000355133 TRIB2Q92519 343 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 SIGLEC10Q96LC7 697 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 ERMAPQ96PL5 475 aaPredicted RBP12.76□□□□□ -0.37
SCN8A-202ENST00000355133 TSGA13Q96PP4 275 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 DCSTAMPQ9H295 470 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 RNF186Q9NXI6 227 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 ACSL5Q9ULC5 683 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 SLC22A1O15245 554 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 OAZ2O95190 189 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 FPR1P21462 350 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 KCNC3Q14003 757 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 CNPY1Q3B7I2 92 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 FLYWCH1Q4VC44 716 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 GPRIN1Q7Z2K8 1008 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 MFSD2AQ8NA29 543 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 C16orf70Q9BSU1 422 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 ACTR3BQ9P1U1 418 aa12.76□□□□□ -0.37
SCN8A-202ENST00000355133 TRIM64A6NGJ6 449 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 RNGTTO60942 597 aaKnown RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 RAB36O95755 333 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 POU6F2P78424 691 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SOX4Q06945 474 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 IRF5Q13568 498 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 ZMYND11Q15326 602 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PPP1R3AQ16821 1122 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 OR8H3Q8N146 312 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 BADQ92934 168 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 FANCFQ9NPI8 374 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 DZANK1Q9NVP4 752 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PCDHB3Q9Y5E6 796 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 IRS2Q9Y4H2 1338 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 C11orf98E9PRG8 122 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 CDRT1O95170 752 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 HTR1AP08908 422 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SLC6A6P31641 620 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 GRK5P34947 590 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PITX1P78337 314 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 GXYLT1Q4G148 440 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 TXNDC5Q8NBS9 432 aaKnown RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SMG8Q8ND04 991 aaKnown RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 DDX1Q92499 740 aaKnown RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PTCHD1Q96NR3 888 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 MCHR1Q99705 422 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 REEP4Q9H6H4 257 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 LAMP5Q9UJQ1 280 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SOCS5O75159 536 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 NR2C1P13056 603 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 CLRN1P58418 232 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 ARPC4P59998 168 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 MAD2L1BPQ15013 274 aaPredicted RBP12.75□□□□□ -0.37
SCN8A-202ENST00000355133 OCLNQ16625 522 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 MEP1AQ16819 746 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 ZNF542PQ5EBM4 170 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 NRROSQ86YC3 692 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 CCDC107Q8WV48 283 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 TGM7Q96PF1 710 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 SLC22A4Q9H015 551 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PTTG2Q9NZH5 202 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 GPR34Q9UPC5 381 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 PLD2O14939 933 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 CYP17A1P05093 508 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 ASGR2P07307 311 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 C8BP07358 591 aa12.75□□□□□ -0.37
SCN8A-202ENST00000355133 GADD45AP24522 165 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms