RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 GATA5Q9BWX5 397 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TTTY10Q9BZA0 68 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC32A1Q9H598 525 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 FHP07954 510 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC35F1Q5T1Q4 408 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF773Q6PK81 442 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 LRRN1Q6UXK5 716 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ALDH16A1Q8IZ83 802 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 LIN37Q96GY3 246 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SNX27Q96L92 541 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TAS2R3Q9NYW6 316 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 PIGBOS1A0A0B4J2F0 54 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 EDDM13A0A1B0GTR0 161 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 A6NCN8 305 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 MSR1P21757 451 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 EDNRBP24530 442 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 AGXT2Q9BYV1 514 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 CACNA1FO60840 1977 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ECI2O75521 394 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 DUOXA1Q1HG43 343 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 GPR157Q5UAW9 335 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 EFCAB11Q9BUY7 163 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ZCCHC11Q5TAX3 1644 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 BICRAQ9NZM4 1560 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF850A8MQ14 1090 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ITGB5P18084 799 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 HNRNPKP61978 463 aaKnown RBP eCLIP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 PMS2P3Q13401 168 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ECM1Q16610 540 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 THOC6Q86W42 341 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ERI1Q8IV48 349 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 WDSUB1Q8N9V3 476 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 NKD2Q969F2 451 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 RADILQ96JH8 1075 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 YTHDF1Q9BYJ9 559 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 PPM1HQ9ULR3 514 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ASCC3Q8N3C0 2202 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 FAM221BA6H8Z2 402 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 OR6C6A6NF89 314 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 PDLIM1O00151 329 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 AARDQ4LEZ3 155 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 GCDHQ92947 438 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 FTCDNL1E5RQL4 147 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC22A2O15244 555 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 MAGEA6P43360 314 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 NUDT6P53370 316 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SWT1Q5T5J6 900 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 HGSNATQ68CP4 663 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 METTL27Q8N6F8 245 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ALG3Q92685 438 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TAS2R9Q9NYW1 312 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 GPRC5BQ9NZH0 403 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 STXBP5LQ9Y2K9 1186 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ACADVLP49748 655 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SSTP61278 116 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 RAET1LQ5VY80 246 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 C3P1Q6ZMU1 363 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC22A16Q86VW1 577 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 GID4Q8IVV7 300 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TMEM234Q8WY98 164 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 AKTIPQ9H8T0 292 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 EIF2B3Q9NR50 452 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 COPZ2Q9P299 210 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 EXOSC1Q9Y3B2 195 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ISPDA4D126 451 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TTLL8A6PVC2 850 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 HAS3O00219 553 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 PLATP00750 562 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 RAB4BP61018 213 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SCAMP5Q8TAC9 235 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 MRIQ9BWK5 157 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 WDR45Q9Y484 360 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 C11orf98E9PRG8 122 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 BCAS1O75363 584 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 CNOT4O95628 575 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 C8orf89P0DMQ9 161 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 CCDC58Q4VC31 144 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TFGQ92734 400 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 POMPQ9Y244 141 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TPRP12270 2363 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 SOX2P48431 317 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 ARRB1P49407 418 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 OR13C3Q8NGS6 347 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TMEM185BQ9H7F4 350 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 TCHHQ07283 1943 aa5.6□□□□□ -1.51
SRGAP1-201ENST00000355086 MBD5Q9P267 1494 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 XPNPEP2O43895 674 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 KLRC4O43908 158 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 GKN3PP0CG01 181 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 SPATA31C1P0DKV0 1188 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 BDKRB1P46663 353 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC36A4Q6YBV0 504 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 AUTS2Q8WXX7 1259 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 PCDHGA2Q9Y5H1 932 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CAPN5O15484 640 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 MRPL3P09001 348 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 PREPP48147 710 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RIDAP52758 137 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 COL28A1Q2UY09 1125 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms