RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RFX2P48378 723 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 DGKEP52429 567 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 CRISP3P54108 245 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 CCL23P55773 120 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 B2MP61769 119 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 FGFBP1Q14512 234 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 CHRNA6Q15825 494 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 ZNF284Q2VY69 593 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 PYDC2Q56P42 97 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 PDZK1Q5T2W1 519 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 PLET1Q6UQ28 207 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RFLNAQ6ZTI6 216 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 TMCO2Q7Z6W1 182 aaPredicted RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 DEFB128Q7Z7B8 93 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 CYP4Z1Q86W10 505 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 ARL14EPQ8N8R7 260 aaPredicted RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 KBTBD8Q8NFY9 601 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 USP7Q93009 1102 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 ISG20Q96AZ6 181 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 SEC22CQ9BRL7 303 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 C1QTNF3Q9BXJ4 246 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 MUC13Q9H3R2 512 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 HMX1Q9NP08 348 aaPredicted RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 IL26Q9NPH9 171 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 HEBP1Q9NRV9 189 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 RDH8Q9NYR8 311 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 SLC25A37Q9NYZ2 338 aa9.04□□□□□ -0.96
SMG6-202ENST00000354901 TNPO3Q9Y5L0 923 aaKnown RBP9.04□□□□□ -0.96
SMG6-202ENST00000354901 CHD5Q8TDI0 1954 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ELOVL7A1L3X0 281 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 H3BM21 787 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 H7C4K7 107 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 CXCR6O00574 342 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ANKRD28O15084 1053 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 TNFSF8P32971 234 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 CLCN4P51793 760 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 GRIK2Q13002 908 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 RUNDC3AQ59EK9 446 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 TXNDC8Q6A555 127 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 KIAA1324Q6UXG2 1013 aaKnown RBP9.03□□□□□ -0.96
SMG6-202ENST00000354901 TMPRSS11AQ6ZMR5 421 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 RIMKLAQ8IXN7 391 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 CYP4Z2PQ8N1L4 340 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 CD99L2Q8TCZ2 262 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 GIMAP1Q8WWP7 306 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 PPP3R2Q96LZ3 170 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 SPATA9Q9BWV2 254 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMG6-202ENST00000354901 P2RY12Q9H244 342 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 LRTM1Q9HBL6 345 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ZNF222Q9UK12 451 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ZNF451Q9Y4E5 1061 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 RGS14O43566 566 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 KIAA0513O60268 411 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 PLOD3O60568 738 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 MTX2O75431 263 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 VIPP01282 170 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 HMGCLP35914 325 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 CBX5P45973 191 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 GNPDA1P46926 289 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 INPP1P49441 399 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 GPR85P60893 370 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 RPA4Q13156 261 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 DDX39BQ13838 428 aaKnown RBP9.03□□□□□ -0.96
SMG6-202ENST00000354901 TCTN1Q2MV58 587 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 CACHD1Q5VU97 1274 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 GPR153Q6NV75 609 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ABI3BPQ7Z7G0 1075 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 LAX1Q8IWV1 398 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 STK40Q8N2I9 435 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 DPP10Q8N608 796 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 PAPD5Q8NDF8 572 aaKnown RBP9.03□□□□□ -0.96
SMG6-202ENST00000354901 SLC5A11Q8WWX8 675 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 FAM120BQ96EK7 910 aaKnown RBP9.03□□□□□ -0.96
SMG6-202ENST00000354901 KCNN2Q9H2S1 579 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ARL15Q9NXU5 204 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 DLGAP4Q9Y2H0 992 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 MYOFQ9NZM1 2061 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 TEX51A0A1B0GUA7 166 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 TOR1AO14656 332 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 GLUD1P00367 558 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 SERPINA1P01009 418 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 IFNA16P05015 189 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 EPB42P16452 691 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ALAS2P22557 587 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 TACR1P25103 407 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ERVFC1P60507 584 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 BCL2L1Q07817 233 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 C2orf80Q0P641 193 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 NFATC2Q13469 925 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 PCBP2Q15366 365 aaKnown RBP eCLIP9.03□□□□□ -0.961e-8■■■■■ 30.8
SMG6-202ENST00000354901 TATDN3Q17R31 274 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 ZNF691Q5VV52 312 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 IRAK1BP1Q5VVH5 260 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 SHEQ5VZ18 495 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 RBFAQ8N0V3 343 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 OR8K3Q8NH51 312 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 INPP5KQ9BT40 448 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 C11orf54Q9H0W9 315 aaPredicted RBP9.03□□□□□ -0.96
SMG6-202ENST00000354901 CD84Q9UIB8 345 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms