RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CCDC71Q8IV32 467 aaPredicted RBP8.27□□□□□ -1.09
TRIM55-204ENST00000353317 MINDY2Q8NBR6 621 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 PHF10Q8WUB8 498 aaKnown RBP8.27□□□□□ -1.09
TRIM55-204ENST00000353317 LGALS12Q96DT0 336 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 PPP1R16AQ96I34 528 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 VPS35Q96QK1 796 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 NRTNQ99748 197 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 NTMT1Q9BV86 223 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 GABARAPL1Q9H0R8 117 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 OR2AG1Q9H205 316 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 PARVBQ9HBI1 364 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 IL1RAPQ9NPH3 570 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 DYRK4Q9NR20 520 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 FBXL12Q9NXK8 326 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 ASIC5Q9NY37 505 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 SCHIP1Q9P0W5 487 aaPredicted RBP8.27□□□□□ -1.09
TRIM55-204ENST00000353317 NDRG2Q9UN36 371 aaKnown RBP8.27□□□□□ -1.09
TRIM55-204ENST00000353317 GMPPBQ9Y5P6 360 aa8.27□□□□□ -1.09
TRIM55-204ENST00000353317 GPC6Q9Y625 555 aaPredicted RBP8.27□□□□□ -1.09
TRIM55-204ENST00000353317 PCM1Q15154 2024 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 A0A096LPI6 279 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 MYO1GB0I1T2 1018 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 hCG_2039718K7EN88 272 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PCDH8O95206 1070 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 EPB42P16452 691 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 RGS4P49798 205 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ST13P50502 369 aaKnown RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 CLDN8P56748 225 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 DPTQ07507 201 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 GAS6Q14393 721 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ZNF284Q2VY69 593 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 CCSMST1Q4G0I0 132 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ZDHHC20Q5W0Z9 365 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 RAET1GQ6H3X3 334 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 OR2T5Q6IEZ7 315 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 TMEM53Q6P2H8 277 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 DOK6Q6PKX4 331 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 RNF165Q6ZSG1 346 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PAGE2Q7Z2X7 111 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 FAM124AQ86V42 546 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 SLC22A16Q86VW1 577 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 NRSN1Q8IZ57 195 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ABCA7Q8IZY2 2146 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ZNF687Q8N1G0 1237 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 TMEM132CQ8N3T6 1108 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 LMNTD1Q8N9Z9 388 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 TTC29Q8NA56 475 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 FLCNQ8NFG4 579 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 OR2T29Q8NH02 315 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 HLA-CQ95604 372 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 FAM131CQ96AQ9 280 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ULK4Q96C45 1275 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 EGLN2Q96KS0 407 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 MRGPRX1Q96LB2 322 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 TSSK3Q96PN8 268 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 FZD3Q9NPG1 666 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 RASSF1Q9NS23 344 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 TM7SF3Q9NS93 570 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 SCN3BQ9NY72 215 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 GPRC5BQ9NZH0 403 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 TRPS1Q9UHF7 1281 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PNMA8BQ9ULN7 279 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 NDRG4Q9ULP0 352 aaKnown RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PPT2Q9UMR5 302 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 MAN2B2Q9Y2E5 1009 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 AP3M1Q9Y2T2 418 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ARHGEF17Q96PE2 2063 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 RGS10O43665 173 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 WDR47O94967 919 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 CCNDBP1O95273 360 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PDYNP01213 254 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 LCKP06239 509 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ZNF8P17098 575 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 EPORP19235 508 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 C5AR1P21730 350 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 MAT2AP31153 395 aaKnown RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 S100A3P33764 101 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 KRT20P35900 424 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 GPR1P46091 355 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 NEK2P51955 445 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PPP2CBP62714 309 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PPP2CAP67775 309 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 VLDLRP98155 873 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 ABHD18Q0P651 414 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 FZD5Q13467 585 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 MAD2L1BPQ15013 274 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PTCRAQ6ISU1 281 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 TMEM220Q6QAJ8 160 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 VTCN1Q7Z7D3 282 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 C11orf96Q7Z7L8 435 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 FRMD1Q8N878 549 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 RHOXF1Q8NHV9 184 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 CXorf40AQ8TE69 158 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 FAM3CQ92520 227 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 TBC1D20Q96BZ9 403 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PYCR2Q96C36 320 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 DSN1Q9H410 356 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 PDP1Q9P0J1 537 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-204ENST00000353317 SLC23A2Q9UGH3 650 aa8.26□□□□□ -1.09
TRIM55-204ENST00000353317 SAMD4AQ9UPU9 718 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms