RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FAM86C2PA6NEL3 165 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 ANKDD1BA6NHY2 528 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 SAC3D1A6NKF1 404 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 OR52A4PA6NMU1 304 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 PDZK1P1A8MUH7 402 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 H0Y8X5 98 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 SAP18O00422 153 aaKnown RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 MAN2B1O00754 1011 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 CAPN5O15484 640 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 LCMT2O60294 686 aaKnown RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TPST1O60507 370 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 DEAF1O75398 565 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 PRKD3O94806 890 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 CCNDBP1O95273 360 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 CPSF4O95639 269 aaKnown RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 SEMA4FO95754 770 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 EML2O95834 649 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 IGHV4-34P06331 123 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 SMIM18P0DKX4 95 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 CHRNB1P11230 501 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 DDCP20711 480 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 IGFBP4P22692 258 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 HTR1BP28222 390 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 AKT2P31751 481 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 SHMT2P34897 504 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 FRKP42685 505 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 MAGEA2P43356 314 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TAS2R50P59544 299 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TRA2BP62995 288 aaKnown RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 MYBPC1Q00872 1141 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 MC1RQ01726 317 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TFF2Q03403 129 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 C2orf80Q0P641 193 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 VEZF1Q14119 521 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 RGNQ15493 299 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 NRF1Q16656 503 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 ALG11Q2TAA5 492 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TMEM35AQ53FP2 167 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 C6orf52Q5T4I8 152 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 KIAA0895LQ68EN5 471 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 ENPP7Q6UWV6 458 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 NRROSQ86YC3 692 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TTLQ8NG68 377 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 OR2L3Q8NG85 312 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 FLVCR1-AS1Q8TAF5 88 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 FAM162AQ96A26 154 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TBC1D20Q96BZ9 403 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 PPCDCQ96CD2 204 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TM4SF18Q96CE8 201 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 PYURFQ96I23 114 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 QRFPRQ96P65 431 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 NECAB3Q96P71 396 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 F2RL3Q96RI0 385 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 SEPHS2Q99611 448 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 MYOCQ99972 504 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 BDH2Q9BUT1 245 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 SORBS1Q9BX66 1292 aaKnown RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 ANKRD60Q9BZ19 345 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 ASPSCR1Q9BZE9 553 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 EPS8L2Q9H6S3 715 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 UBE2ZQ9H832 354 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 YY1AP1Q9H869 796 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 DDX31Q9H8H2 851 aaKnown RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 ATAD3AQ9NVI7 634 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 GPATCH2Q9NW75 528 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TRNAU1APQ9NX07 287 aaKnown RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 TAS2R7Q9NYW3 318 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 OR6C2Q9NZP2 312 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 SH3BP4Q9P0V3 963 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 DLGAP2Q9P1A6 1054 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF624Q9P2J8 865 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 DNAJB9Q9UBS3 223 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF282Q9UDV7 671 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 PNMA8BQ9ULN7 279 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-203ENST00000350034 OAZ3Q9UMX2 235 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 VPS4AQ9UN37 437 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 CORO2BQ9UQ03 480 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 DGKBQ9Y6T7 804 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 COLEC10Q9Y6Z7 277 aa6.61□□□□□ -1.35
TRIM55-203ENST00000350034 CHD7Q9P2D1 2997 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 FEZF1A0PJY2 475 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 LRIT2A6NDA9 550 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 EIF4E1BA6NMX2 242 aaKnown RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 TMEM229AB2RXF0 380 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PRAMEF26H0Y7S4 382 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PDLIM1O00151 329 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 PLOD2O00469 737 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 TXNDC9O14530 226 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 EI24O14681 340 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 NDUFS4O43181 175 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 OR1F1O43749 312 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 TMPRSS11DO60235 418 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 KDM1AO60341 852 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 DPM1O60762 260 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 TNFRSF21O75509 655 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 GCM2O75603 506 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-203ENST00000350034 C6orf47O95873 294 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 SERPINA1P01009 418 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 GBAP04062 536 aa6.6□□□□□ -1.35
TRIM55-203ENST00000350034 IL3P08700 152 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms