RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GULP1Q9UBP9 304 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 POU2F3Q9UKI9 436 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 TNFRSF21O75509 655 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 ADORA3P0DMS8 318 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 ARMCX4Q5H9R4 360 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 LINC00299Q6ZSB3 139 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 SLC46A3Q7Z3Q1 461 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 RNF130Q86XS8 419 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 TMC8Q8IU68 726 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 SYTL1Q8IYJ3 562 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 ZNF558Q96NG5 402 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 OGDHLQ9ULD0 1010 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 UPK1BO75841 260 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 KLHL18O94889 574 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 TIA1P31483 386 aaKnown RBP eCLIP17.35■□□□□ 0.373e-8■■■□□ 15.4
PTP4A3-202ENST00000349124 SLC7A9P82251 487 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 SCARB2Q14108 478 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 SLC5A12Q1EHB4 618 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 SLCO4C1Q6ZQN7 724 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 ARMC8Q8IUR7 673 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 STX19Q8N4C7 294 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 AGAP5A6NIR3 686 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 UGDHO60701 494 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 TIMP2P16035 220 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 GABRB1P18505 474 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 HNF4AP41235 474 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 PRIM2P49643 509 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 MICAQ29983 383 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 TMEM220Q6QAJ8 160 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 COMMD6Q7Z4G1 85 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 ZNF605Q86T29 641 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 ZNF480Q8WV37 535 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 ITPKCQ96DU7 683 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 SLC25A13Q9UJS0 675 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 RAB23Q9ULC3 237 aa17.35■□□□□ 0.37
PTP4A3-202ENST00000349124 KCNK2O95069 426 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 CTSLP07711 333 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 POU1F1P28069 291 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 NKX2-5P52952 324 aaPredicted RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 B3GNT7Q8NFL0 401 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 MYDGFQ969H8 173 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 VWCEQ96DN2 955 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 TCEAL4Q96EI5 215 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 CFAP20Q9Y6A4 193 aaKnown RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 GRM6O15303 877 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 IGFBP1P08833 259 aaPredicted RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 ALOX5P09917 674 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 ASMTP46597 345 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 METAP1P53582 386 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 C21orf58P58505 322 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 C2orf80Q0P641 193 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 GRIN2CQ14957 1233 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 TBCEQ15813 527 aaPredicted RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 KCNJ8Q15842 424 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 LEXMQ3ZCV2 418 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 IFI44LQ53G44 452 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 ANXA8L1Q5VT79 327 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 KLHL17Q6TDP4 642 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 METTL3Q86U44 580 aaKnown RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 ADIPOR2Q86V24 386 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 HEATR4Q86WZ0 1026 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 KIAA1958Q8N8K9 716 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 RSPO3Q9BXY4 272 aaPredicted RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 C1GALT1Q9NS00 363 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 ACER3Q9NUN7 267 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 TRAV19A0A0A6YYK7 116 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 KPNA5O15131 536 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 ADAMDEC1O15204 470 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 KLK1P06870 262 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 PABPC1P11940 636 aaKnown RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 NPPBP16860 134 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 TAS2R50P59544 299 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 RPS26P62854 115 aaKnown RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 DEFB103AP81534 67 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 TMEM115Q12893 351 aaPredicted RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 STARD3Q14849 445 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 DUSP7Q16829 419 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 TPRG1LQ5T0D9 272 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 HENMT1Q5T8I9 393 aaKnown RBP17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 CYP4Z2PQ8N1L4 340 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 PARP16Q8N5Y8 322 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 OR56A3Q8NH54 315 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 BTN2A2Q8WVV5 523 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 MMP27Q9H306 513 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 REEP4Q9H6H4 257 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 FKBP14Q9NWM8 211 aa17.34■□□□□ 0.37
PTP4A3-202ENST00000349124 ZNF106Q9H2Y7 1883 aaKnown RBP17.33■□□□□ 0.37
PTP4A3-202ENST00000349124 RNASET2O00584 256 aaKnown RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 DLGAP3O95886 979 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 GASTP01350 101 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 CATP04040 527 aaKnown RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 VIPR1P32241 457 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 RGS6P49758 472 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 POLR2LP62875 67 aaKnown RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 SLBPQ14493 270 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 PTGES3Q15185 160 aaKnown RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 SPATC1Q76KD6 591 aa17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 WRAP53Q9BUR4 548 aaKnown RBP17.33■□□□□ 0.36
PTP4A3-202ENST00000349124 BRF2Q9HAW0 419 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms