RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ARHGDIAP52565 204 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 PIP5KL1Q5T9C9 394 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 ARMC8Q8IUR7 673 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 TSSK3Q96PN8 268 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 NRTNQ99748 197 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 DZANK1Q9NVP4 752 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 SNX6Q9UNH7 406 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 TRBV5-3A0A0A0MS03 114 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 H3BM21 787 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 QSOX1O00391 747 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 SH3BGRLO75368 114 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 LCKP06239 509 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 PCYT1AP49585 367 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 IRF8Q02556 426 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 NFE2L1Q14494 772 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 XKR6Q5GH73 641 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 DEPDC1Q5TB30 811 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 FRG2Q64ET8 278 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 CAPN13Q6MZZ7 669 aaPredicted RBP20.46■□□□□ 0.87
PTPN18-202ENST00000347849 CALHM3Q86XJ0 350 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 MCFD2Q8NI22 146 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 ZHX1-C8orf76Q96EF9 292 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 PPP1R16AQ96I34 528 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 FRG2BQ96QU4 278 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 MTERF1Q99551 399 aaKnown RBP20.46■□□□□ 0.87
PTPN18-202ENST00000347849 SLC28A3Q9HAS3 691 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 ATG2BQ96BY7 2078 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 KIAA1549LQ6ZVL6 1849 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 MID1O15344 667 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 GSSP48637 474 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 TAS2R38P59533 333 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 DOC2AQ14183 400 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 TMEM52BQ4KMG9 183 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 C2orf27AQ580R0 203 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 ANKRD54Q6NXT1 300 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 TTC23LQ6PF05 361 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 FAM83HQ6ZRV2 1179 aaPredicted RBP20.46■□□□□ 0.87
PTPN18-202ENST00000347849 TTC29Q8NA56 475 aaPredicted RBP20.46■□□□□ 0.87
PTPN18-202ENST00000347849 LGR4Q9BXB1 951 aa20.46■□□□□ 0.87
PTPN18-202ENST00000347849 EFCAB9A8MZ26 197 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 LRATO95237 230 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 SEPHS1P49903 392 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 CXCR4P61073 352 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 DDX39BQ13838 428 aaKnown RBP20.45■□□□□ 0.86
PTPN18-202ENST00000347849 DOK6Q6PKX4 331 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 YAF2Q8IY57 180 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 APOLD1Q96LR9 279 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 APOL4Q9BPW4 351 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 CPPED1Q9BRF8 314 aaPredicted RBP20.45■□□□□ 0.86
PTPN18-202ENST00000347849 EBPLQ9BY08 206 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 LMAN2LQ9H0V9 348 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 TRIM39Q9HCM9 518 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 SH2B3Q9UQQ2 575 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 STON1Q9Y6Q2 735 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 IGLON5A6NGN9 336 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 hCG_2039718K7EN88 272 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 POP7O75817 140 aaKnown RBP20.45■□□□□ 0.86
PTPN18-202ENST00000347849 C1orf105O95561 183 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 CATP04040 527 aaKnown RBP20.45■□□□□ 0.86
PTPN18-202ENST00000347849 JUPP14923 745 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 RCVRNP35243 200 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 DPTQ07507 201 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 KEAP1Q14145 624 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 SYT16Q17RD7 645 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 KDM4DQ6B0I6 523 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 OR2T5Q6IEZ7 315 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 SVOPQ8N4V2 548 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 OR2T29Q8NH02 315 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 SERHLQ9NQF3 203 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 PRDM8Q9NQV8 689 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 PDP1Q9P0J1 537 aaPredicted RBP20.45■□□□□ 0.86
PTPN18-202ENST00000347849 OSGIN1Q9UJX0 560 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 AP3M1Q9Y2T2 418 aa20.45■□□□□ 0.86
PTPN18-202ENST00000347849 ERN1O75460 977 aaKnown RBP20.44■□□□□ 0.86
PTPN18-202ENST00000347849 SDC1P18827 310 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 CDKN2CP42773 168 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 RPS14P62263 151 aaKnown RBP20.44■□□□□ 0.86
PTPN18-202ENST00000347849 BCL7AQ4VC05 210 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 AHSA2Q719I0 299 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 C11orf96Q7Z7L8 435 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 GALNT10Q86SR1 603 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 CXorf40AQ8TE69 158 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 ZNF480Q8WV37 535 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 EFHD2Q96C19 240 aaPredicted RBP20.44■□□□□ 0.86
PTPN18-202ENST00000347849 MRPL38Q96DV4 380 aaKnown RBP20.44■□□□□ 0.86
PTPN18-202ENST00000347849 SLX1AQ9BQ83 275 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 SIAEQ9HAT2 523 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 TM7SF3Q9NS93 570 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 PPT2Q9UMR5 302 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 IL1RNP18510 177 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 S100A3P33764 101 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 CLK1P49759 484 aaKnown RBP20.44■□□□□ 0.86
PTPN18-202ENST00000347849 SEC13P55735 322 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 MAD2L1BPQ15013 274 aaPredicted RBP20.44■□□□□ 0.86
PTPN18-202ENST00000347849 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.44■□□□□ 0.86
PTPN18-202ENST00000347849 ZNF765Q7L2R6 523 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 TMEM132CQ8N3T6 1108 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 WDR20Q8TBZ3 569 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 KCNH6Q9H252 994 aa20.44■□□□□ 0.86
PTPN18-202ENST00000347849 DCSTAMPQ9H295 470 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms