RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 C16orf62Q7Z3J2 963 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 UCN3Q969E3 161 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 NODALQ96S42 347 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 SLC7A5P2Q9GIP4 190 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 MRPS30Q9NP92 439 aaKnown RBP12.77□□□□□ -0.36
CASC4-202ENST00000345795 ABCB10Q9NRK6 738 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 CYP8B1Q9UNU6 501 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 NCKAP1Q9Y2A7 1128 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 TDRD6O60522 2096 aaKnown RBP12.77□□□□□ -0.36
CASC4-202ENST00000345795 MED12Q93074 2177 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 A8MUA0 341 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 SLC9A5Q14940 896 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 SLC14A2Q15849 920 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 SLC5A12Q1EHB4 618 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 VMACQ2NL98 169 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 WSCD2Q2TBF2 565 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 CEP68Q76N32 757 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 ZNF605Q86T29 641 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 IQCHQ86VS3 1027 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 LGI4Q8N135 537 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 CPXM2Q8N436 756 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 ZNF689Q96CS4 500 aaPredicted RBP12.77□□□□□ -0.37
CASC4-202ENST00000345795 CMTM7Q96FZ5 175 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 TBX5Q99593 518 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 USE1Q9NZ43 259 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 MAT2BQ9NZL9 334 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 ERVK-18Q9QC07 812 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 TRPS1Q9UHF7 1281 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 RPS6KA6Q9UK32 745 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 SMIM31A0A1B0GVY4 71 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 TRBC2A0A5B9 178 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 PSMD11O00231 422 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 BTN3A3O00478 584 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 INMTO95050 263 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 ASLP04424 464 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 CLDN8P56748 225 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 CDK6Q00534 326 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 DYNC1I2Q13409 638 aaKnown RBP12.77□□□□□ -0.37
CASC4-202ENST00000345795 PLEKHS1Q5SXH7 462 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 LILRA6Q6PI73 481 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 VN1R5Q7Z5H4 357 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 TCAIMQ8N3R3 496 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 FAM160A2Q8N612 972 aaPredicted RBP12.77□□□□□ -0.37
CASC4-202ENST00000345795 GLB1L3Q8NCI6 653 aaPredicted RBP12.77□□□□□ -0.37
CASC4-202ENST00000345795 DTD2Q96FN9 168 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 SRMSQ9H3Y6 488 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 AGPAT4Q9NRZ5 378 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 GIMAP4Q9NUV9 329 aa12.77□□□□□ -0.37
CASC4-202ENST00000345795 PCYT1BQ9Y5K3 369 aaPredicted RBP12.77□□□□□ -0.37
CASC4-202ENST00000345795 POM121BA6NF01 834 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 NADKO95544 446 aaPredicted RBP12.76□□□□□ -0.37
CASC4-202ENST00000345795 IFNA16P05015 189 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 C1GALT1C1LP0DN25 315 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 HSD17B1P14061 328 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 GGT1P19440 569 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 PPP2R1BP30154 601 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 TAP2Q03519 686 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 CD47Q08722 323 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 ZNF763Q0D2J5 394 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 GAB1Q13480 694 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 RAB39AQ14964 217 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 GPR68Q15743 365 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 LCN8Q6JVE9 175 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 SFTPA2Q8IWL1 248 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 PSMA8Q8TAA3 256 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 FEVQ99581 238 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 RBM4BQ9BQ04 359 aaKnown RBP12.76□□□□□ -0.37
CASC4-202ENST00000345795 RBM4Q9BWF3 364 aaKnown RBP12.76□□□□□ -0.37
CASC4-202ENST00000345795 POLE4Q9NR33 117 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 SVILO95425 2214 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 MYO16Q9Y6X6 1858 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 SCELO95171 688 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 C1orf105O95561 183 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 MMP12P39900 470 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 PGDP52209 483 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 SRSF11Q05519 484 aaKnown RBP12.76□□□□□ -0.37
CASC4-202ENST00000345795 XKR7Q5GH72 579 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 SHFQ7M4L6 423 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 MARVELD2Q8N4S9 558 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 DTX3Q8N9I9 347 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 ZNF385DQ9H6B1 395 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 IL21RQ9HBE5 538 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 RAD18Q9NS91 495 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 TAS2R16Q9NYV7 291 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 TVP23BQ9NYZ1 205 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 DNAJC27Q9NZQ0 273 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 CLEC4AQ9UMR7 237 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 DMTF1Q9Y222 760 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 NPIPA5A0A0B4J1W7 369 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 NPIPA7E9PJI5 369 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 NPIPA8P0DM63 369 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
CASC4-202ENST00000345795 ZNF77Q15935 545 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 ZXDCQ2QGD7 858 aaPredicted RBP12.76□□□□□ -0.37
CASC4-202ENST00000345795 TMEM107Q6UX40 140 aa12.76□□□□□ -0.37
CASC4-202ENST00000345795 BCDIN3DQ7Z5W3 292 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms