RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 ADPRHL2Q9NX46 363 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 ERVK-18Q9QC07 812 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 DNAH14Q0VDD8 3507 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 JRKO75564 520 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 CCDC159P0C7I6 412 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 PCGF2P35227 344 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 GSSP48637 474 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 CCR3P51677 355 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 GP2P55259 537 aaKnown RBP18.56■□□□□ 0.56
COL9A3-201ENST00000343916 CCDC71Q8IV32 467 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-201ENST00000343916 RAB2BQ8WUD1 216 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 FKBP10Q96AY3 582 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 OR52A5Q9H2C5 316 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 SLC23A2Q9UGH3 650 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 CORO2BQ9UQ03 480 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 TESMINQ9Y4I5 508 aa18.56■□□□□ 0.56
COL9A3-201ENST00000343916 NUMA1Q14980 2115 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 ZBTB11O95625 1053 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-201ENST00000343916 PPIBP23284 216 aaKnown RBP18.55■□□□□ 0.56
COL9A3-201ENST00000343916 P2RY2P41231 377 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 DPTQ07507 201 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 ERN2Q76MJ5 926 aaKnown RBP18.55■□□□□ 0.56
COL9A3-201ENST00000343916 PIWIL3Q7Z3Z3 882 aaKnown RBP18.55■□□□□ 0.56
COL9A3-201ENST00000343916 VN1R5Q7Z5H4 357 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 SETD9Q8NE22 299 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 MAGED4Q96JG8 741 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 LINC00615Q96LM1 132 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-201ENST00000343916 DOHHQ9BU89 302 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 LGR4Q9BXB1 951 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 TMEM245Q9H330 911 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 PRKAG2Q9UGJ0 569 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 DOLKQ9UPQ8 538 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 SH3GLB1Q9Y371 365 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 NAALAD2Q9Y3Q0 740 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 MAP4K5Q9Y4K4 846 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 DOCK9Q9BZ29 2069 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 TBC1D3BA6NDS4 549 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 IL12RB1P42701 662 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 MAP2K4P45985 399 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 UBE3AQ05086 875 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 KEAP1Q14145 624 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 PRAMEF14Q5SWL7 426 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 PRAMEF13Q5VWM6 474 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 Q6ZPB1 254 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-201ENST00000343916 ZNF765Q7L2R6 523 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 BORCS5Q969J3 196 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 PPP1R16AQ96I34 528 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 DPEP2Q9H4A9 486 aa18.55■□□□□ 0.56
COL9A3-201ENST00000343916 NDRG4Q9ULP0 352 aaKnown RBP18.55■□□□□ 0.56
COL9A3-201ENST00000343916 GOLGA4Q13439 2230 aaKnown RBP18.54■□□□□ 0.56
COL9A3-201ENST00000343916 C17orf113A0A1B0GUU1 675 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 J3QRK9 145 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 NFATC1O95644 943 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 IL3P08700 152 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 C21orf59P57076 290 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 CYP4F2P78329 520 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 AQP6Q13520 282 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 SLC5A12Q1EHB4 618 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 TMIGD1Q6UXZ0 262 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 SLC16A12Q6ZSM3 486 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 FAM124AQ86V42 546 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 RNF130Q86XS8 419 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 OR52J3Q8NH60 311 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 NFKBIDQ8NI38 313 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 CXorf40AQ8TE69 158 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 ZNF566Q969W8 418 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 PLEKHA8Q96JA3 519 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 ASB16Q96NS5 453 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 SPATA9Q9BWV2 254 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 EHD1Q9H4M9 534 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 NDUFAF4Q9P032 175 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 PSME2Q9UL46 239 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 MAPRE3Q9UPY8 281 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 TNFRSF21O75509 655 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 C9P02748 559 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 PCCBP05166 539 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 EPHX1P07099 455 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 CD6P30203 668 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 SELENOWP63302 87 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 CNTN1Q12860 1018 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 FOXD4Q12950 439 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-201ENST00000343916 CBX3Q13185 183 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 CAMK2GQ13555 558 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-201ENST00000343916 SPCS2Q15005 226 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 ZNF829Q3KNS6 432 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-201ENST00000343916 FAM71E1Q6IPT2 247 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 HEATR4Q86WZ0 1026 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 PARP8Q8N3A8 854 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 METTL4Q8N3J2 472 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 FAR1Q8WVX9 515 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 CXorf40BQ96DE9 158 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 ZNF514Q96K75 400 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-201ENST00000343916 ATAD3AQ9NVI7 634 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 GPR34Q9UPC5 381 aa18.54■□□□□ 0.56
COL9A3-201ENST00000343916 PLXND1Q9Y4D7 1925 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 TRANK1O15050 2925 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 GRXCR1A8MXD5 290 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 M0QX08 132 aa18.53■□□□□ 0.56
COL9A3-201ENST00000343916 RTCAO00442 366 aaKnown RBP18.53■□□□□ 0.56
COL9A3-201ENST00000343916 BCL10O95999 233 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms