RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 GPR151Q8TDV0 419 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TRUB1Q8WWH5 349 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 AHCYL2Q96HN2 611 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 SP140LQ9H930 580 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 ZNF222Q9UK12 451 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 PCDHGA8Q9Y5G5 932 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 A0A1B0GUL6 1792 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 GLOD5A6NK44 160 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 RTCAO00442 366 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 CDK4P11802 303 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 SDC1P18827 310 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 Q6ZSR9 355 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 IQCHQ86VS3 1027 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 SPNS2Q8IVW8 549 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TCEAL8Q8IYN2 117 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 SNX33Q8WV41 574 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 KCTD7Q96MP8 289 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 IFT27Q9BW83 186 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 ACSL6Q9UKU0 697 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 PLAGL1Q9UM63 463 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 EDDM13A0A1B0GTR0 161 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 BCAS1O75363 584 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 CH25HO95992 272 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 BCAP31P51572 246 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 ZNF155Q12901 538 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 RNASE12Q5GAN4 147 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 LCN1P1Q5VSP4 162 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TUBA3EQ6PEY2 450 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 ABHD11Q8NFV4 315 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 GTF2H4Q92759 462 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 LRIG1Q96JA1 1093 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 DMRTB1Q96MA1 342 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 MGLLQ99685 303 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 C17orf62Q9BQA9 187 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 RNF38Q9H0F5 515 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 PAK1IP1Q9NWT1 392 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 TAS2R7Q9NYW3 318 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 IKZF2Q9UKS7 526 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 SNX7Q9UNH6 387 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 FAM170BA6NMN3 283 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 ARHGEF33A8MVX0 844 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 UBFD1O14562 309 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 C8orf89P0DMQ9 161 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 ETFAP13804 333 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 RAB25P57735 213 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 OR2B6P58173 313 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TMEM44Q2T9K0 475 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 NADSYN1Q6IA69 706 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 SLC8B1Q6J4K2 584 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 CCDC80Q76M96 950 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TRIM73Q86UV7 250 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TSPYL5Q86VY4 417 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 DCP2Q8IU60 420 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 SLC22A15Q8IZD6 547 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TEX26Q8N6G2 289 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 GFM1Q96RP9 751 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 KCNN2Q9H2S1 579 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 DPEP2Q9H4A9 486 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 CHURC1-FNTBB4DL54 471 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 H0YC42 278 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 H3BMQ9 156 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ZNF195O14628 629 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 STSP08842 583 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CD72P21854 359 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 DDX6P26196 483 aaKnown RBP eCLIP6.92□□□□□ -1.3
VCAN-202ENST00000342785 APLP1P51693 650 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TBPL1P62380 186 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CLCA4Q14CN2 919 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 RUNDC3AQ59EK9 446 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 COG8Q96MW5 612 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 INPP5KQ9BT40 448 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TSSK6Q9BXA6 273 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 LHPPQ9H008 270 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 EHD1Q9H4M9 534 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MAGIXQ9H6Y5 334 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CEPT1Q9Y6K0 416 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 A0A0J9YVX5 310 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 DAPL1A0PJW8 107 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 WBP4O75554 376 aaKnown RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 RHOP08100 348 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CSF2RAP15509 400 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ZNF8P17098 575 aaPredicted RBP6.92□□□□□ -1.3
VCAN-202ENST00000342785 BMXP51813 675 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 GINS1Q14691 196 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 EXOC3L2Q2M3D2 409 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 IER5LQ5T953 404 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TAS1R1Q7RTX1 841 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 ZSWIM9Q86XI8 627 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 SLC5A8Q8N695 610 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 FAM46DQ8NEK8 389 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 OR7G3Q8NG95 312 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 OR4C6Q8NH72 309 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MAL2Q969L2 176 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 COQ7Q99807 217 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 TRPV5Q9NQA5 729 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 MCUBQ9NWR8 336 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 GPRC5BQ9NZH0 403 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 USP22Q9UPT9 525 aa6.92□□□□□ -1.3
VCAN-202ENST00000342785 CHD4Q14839 1912 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms