RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 IQCF1Q8N6M8 205 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 DNAJB8Q8NHS0 232 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF461Q8TAF7 563 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CXorf40AQ8TE69 158 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 GEMIN6Q8WXD5 167 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 AP3S1Q92572 193 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 QRFPRQ96P65 431 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ANKRA2Q9H9E1 313 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 TBC1D14Q9P2M4 693 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 TAC3Q9UHF0 121 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF232Q9UNY5 417 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 MAPRE3Q9UPY8 281 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 N6AMT1Q9Y5N5 214 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNFX1Q9P2E3 1918 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 C8AP07357 584 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CD40LGP29965 261 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 RCVRNP35243 200 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 AP1S2P56377 157 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 SNRPD2P62316 118 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ADARB1P78563 741 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ABATP80404 500 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 MAD2L1BPQ15013 274 aaPredicted RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 NCEH1Q6PIU2 408 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 GDPD4Q6W3E5 623 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 PHYKPLQ8IUZ5 450 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 DCAF4L2Q8NA75 395 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 POP5Q969H6 163 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 PAWRQ96IZ0 340 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ACOT13Q9NPJ3 140 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 HEBP1Q9NRV9 189 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 TAS2R9Q9NYW1 312 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 MRPS23Q9Y3D9 190 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 HSPB11Q9Y547 144 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 AOC2O75106 756 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ACRP10323 421 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC2A2P11168 524 aaPredicted RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 DAPP51397 102 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 SGCGQ13326 291 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CPZQ66K79 652 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 DLEU7Q6UYE1 221 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 PAPD5Q8NDF8 572 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 HUS1BQ8NHY5 278 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CHPT1Q8WUD6 406 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 AIF1LQ9BQI0 150 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 TRIT1Q9H3H1 467 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF510Q9Y2H8 683 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 PCDHB11Q9Y5F2 797 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 NOTOA8MTQ0 251 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 H3BSH0 61 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 PGRMC2O15173 223 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 KLKB1P03952 638 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 H1F0P07305 194 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CELP19835 753 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CPN2P22792 545 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CD70P32970 193 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 LEXMQ3ZCV2 418 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 LCN1P1Q5VSP4 162 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF691Q5VV52 312 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 MZT2AQ6P582 158 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CADM3Q8N126 398 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 MINDY2Q8NBR6 621 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 FAM83FQ8NEG4 500 aaPredicted RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 UCK2Q9BZX2 261 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 MMP28Q9H239 520 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 TMEM98Q9Y2Y6 226 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 J3KTA2 159 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 ARNTLO00327 626 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 TNFRSF10BO14763 440 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 RETP07949 1114 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 HOXB6P17509 224 aaKnown RBP11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 CCR7P32248 378 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC35F1Q5T1Q4 408 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 PRSS48Q7RTY5 328 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF551Q7Z340 670 aaPredicted RBP11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 ADAMTS15Q8TE58 950 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 GAL3ST1Q99999 423 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF385DQ9H6B1 395 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 TMED5Q9Y3A6 229 aa11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 RPL36Q9Y3U8 105 aaKnown RBP11.96□□□□□ -0.49
SNRNP48-201ENST00000342415 QSOX1O00391 747 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 INHAP05111 366 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 HLA-EP13747 358 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 CA5AP35218 305 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 CTSOP43234 321 aaPredicted RBP11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 NOGQ13253 232 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 LASP1Q14847 261 aaKnown RBP11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 WSCD2Q2TBF2 565 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 FAM129CQ86XR2 697 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 CELF5Q8N6W0 485 aaKnown RBP11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 OR10H4Q8NGA5 316 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 OR52L1Q8NGH7 329 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 TIFAQ96CG3 184 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 P2RY13Q9BPV8 354 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 FAIM2Q9BWQ8 316 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 BRINP2Q9C0B6 783 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 GORASP2Q9H8Y8 452 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 SIAEQ9HAT2 523 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms