RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CTPS2Q9NRF8 586 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 IKZF3Q9UKT9 509 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 A0A1W2PPC4 97 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 CIB4A0PJX0 185 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 CITO14578 2027 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 TFECO14948 347 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 KRT8P05787 483 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 CD1DP15813 335 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 PORP16435 677 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 SELENOVP59797 346 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 KLF1Q13351 362 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 SERTAD2Q14140 314 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 RAB11FIP2Q7L804 512 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 TMEM151BQ8IW70 566 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 BANPQ8N9N5 519 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 OR14L1PQ8NHC6 308 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 SOX17Q9H6I2 414 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 STOX2Q9P2F5 926 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 SGK494L7N484 410 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 MAGEB3O15480 346 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 CDKN2DP55273 166 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 FLYWCH1Q4VC44 716 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 OR4N5Q8IXE1 308 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 PJA1Q8NG27 643 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 OR6N1Q8NGY5 312 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 DNAJB8Q8NHS0 232 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 GAB3Q8WWW8 586 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 TRIM4Q9C037 500 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 TBC1D23Q9NUY8 699 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 AP4S1Q9Y587 144 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 NPIPA5E9PKD4 350 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 EDF1O60869 148 aaKnown RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 CHRM5P08912 532 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 ADSLP30566 484 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 KIAA1024LP59773 190 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 ZNF33BQ06732 778 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 ZDHHC24Q6UX98 284 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 OR10A6Q8NH74 314 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 MOAP1Q96BY2 351 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 SERINC2Q96SA4 455 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 INSM2Q96T92 566 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 CUTCQ9NTM9 273 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 NFS1Q9Y697 457 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 HYKKA2RU49 373 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 CD46P15529 392 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 RANBP1P43487 201 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 PRLHRP49683 370 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 DLX2Q07687 328 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 KLHL4Q9C0H6 718 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 ZNF624Q9P2J8 865 aaPredicted RBP12.31□□□□□ -0.44
LIN54-201ENST00000340417 RDH16O75452 317 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 FABP3P05413 133 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 BCHEP06276 602 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 VHLP40337 213 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 GPLD1P80108 840 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 HLA-BQ31612 363 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 REP15Q6BDI9 236 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 WBP2Q969T9 261 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 OR1F2PQ96R84 312 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 UPB1Q9UBR1 384 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 RIMKLBQ9ULI2 386 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 PDE10AQ9Y233 779 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 PSAT1Q9Y617 370 aa12.31□□□□□ -0.44
LIN54-201ENST00000340417 H0Y8X5 98 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 SEC14L5O43304 696 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 BCAS2O75934 225 aaPredicted RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 RENP00797 406 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 PRLP01236 227 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 ZNF888P0CJ79 500 aaPredicted RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 NR2C1P13056 603 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 ACPPP15309 386 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 OPRD1P41143 372 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 YAP1P46937 504 aaKnown RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 MAPK14Q16539 360 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 LAIR1Q6GTX8 287 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 DEPDC4Q8N2C3 294 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 DOK4Q8TEW6 326 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 TMEM79Q9BSE2 394 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 SLC12A9Q9BXP2 914 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 METTL12A8MUP2 240 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 CPNE3O75131 537 aaKnown RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 TIPRLO75663 272 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 C6orf47O95873 294 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 ZNF28P17035 718 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 ENDOUP21128 410 aaKnown RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 GPX6P59796 221 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 HSD11B2P80365 405 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 NOXRED1Q6NXP6 359 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 IQCHQ86VS3 1027 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 ZNF100Q8IYN0 542 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 OR52E4Q8NGH9 312 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 ZNF778Q96MU6 729 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 REEP4Q9H6H4 257 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 MYO7AQ13402 2215 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 IL3P08700 152 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 FAM58BPP0C7Q3 252 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms