RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 YIPF7Q8N8F6 280 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 COL21A1Q96P44 957 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 TUBA1CQ9BQE3 449 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 C1orf21Q9H246 121 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 COL11A1P12107 1806 aaPredicted RBP11.87□□□□□ -0.51
FN1-202ENST00000336916 LEFTY2O00292 366 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 RPL17P18621 184 aaKnown RBP11.87□□□□□ -0.51
FN1-202ENST00000336916 STC1P52823 247 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 ADGRE1Q14246 886 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 CDK10Q15131 360 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 TIGD6Q17RP2 521 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 TFAP2BQ92481 460 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 PTPN18Q99952 460 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 GPRC5BQ9NZH0 403 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 NENFQ9UMX5 172 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 HERV-K104P61576 105 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 MFSD13AQ14CX5 517 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 SLC22A14Q9Y267 594 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 NHSL1Q5SYE7 1610 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 A0A1B0GVI7 797 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 MTMR11A4FU01 709 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 DNAJB5O75953 348 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 TGFB1P01137 390 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 ACRP10323 421 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 KCNJ2P63252 427 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 GRM2Q14416 872 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 FLYWCH1Q4VC44 716 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 PHOSPHO1Q8TCT1 267 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 PYURFQ96I23 114 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 ZNF382Q96SR6 550 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 MYNNQ9NPC7 610 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 TEX264Q9Y6I9 313 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
FN1-202ENST00000336916 AGRPO00253 132 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 AOC2O75106 756 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 ARHGEF15O94989 841 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 TMEM115Q12893 351 aaPredicted RBP11.87□□□□□ -0.51
FN1-202ENST00000336916 RPA4Q13156 261 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 LIN52Q52LA3 116 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 TIFABQ6ZNK6 161 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 LINGO2Q7L985 606 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 LDB1Q86U70 411 aaPredicted RBP11.87□□□□□ -0.51
FN1-202ENST00000336916 LENG8Q96PV6 779 aaPredicted RBP11.87□□□□□ -0.51
FN1-202ENST00000336916 ERVK-5Q9HDB9 667 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 RREB1Q92766 1687 aa11.87□□□□□ -0.51
FN1-202ENST00000336916 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
FN1-202ENST00000336916 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.86□□□□□ -0.51
FN1-202ENST00000336916 HSPA12AO43301 675 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CER1O95813 267 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 HCKP08631 526 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 RYKP34925 604 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 NRG1Q02297 640 aaPredicted RBP11.86□□□□□ -0.51
FN1-202ENST00000336916 MLIPQ5VWP3 458 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 PAQR3Q6TCH7 311 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 ZER1Q7Z7L7 766 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 OR56A3Q8NH54 315 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CREB3L1Q96BA8 519 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 IGSF21Q96ID5 467 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 METTL8Q9H825 291 aaKnown RBP11.86□□□□□ -0.51
FN1-202ENST00000336916 MGAT4BQ9UQ53 548 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CACNA1DQ01668 2161 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 GMFGO60234 142 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 DBIP07108 87 aaKnown RBP11.86□□□□□ -0.51
FN1-202ENST00000336916 HTR1AP08908 422 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CHRNB2P17787 502 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 S1PR1P21453 382 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 PDHA2P29803 388 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
FN1-202ENST00000336916 GLP1RP43220 463 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CRISP1P54107 249 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CCINQ13939 588 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 SERTAD2Q14140 314 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CDKL4Q5MAI5 379 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 MAMDC4Q6UXC1 1216 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 NRROSQ86YC3 692 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CBR4Q8N4T8 237 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 OR10G2Q8NGC3 310 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 SEC61A2Q9H9S3 476 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 SH3D21A4FU49 640 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 NOBOXO60393 691 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 NPAS3Q8IXF0 933 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 MSANTD3Q96H12 275 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 WDR45Q9Y484 360 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CLCN2P51788 898 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 HSD11B2P80365 405 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 TDGQ13569 410 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 GPRC6AQ5T6X5 926 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 PRAMEF17Q5VTA0 474 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 NOXRED1Q6NXP6 359 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 OR6N1Q8NGY5 312 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 DHRS1Q96LJ7 313 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 SLC22A4Q9H015 551 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 KATNBL1Q9H079 304 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 TBC1D17Q9HA65 648 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 FABP12A6NFH5 140 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 VSTM2BA6NLU5 285 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 CTBP2P56545 445 aa11.86□□□□□ -0.51
FN1-202ENST00000336916 BDH1Q02338 343 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms