RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SOBPA7XYQ1 873 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 VEGFDO43915 354 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 GSTT1P30711 240 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 NTSR1P30989 418 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ARSFP54793 590 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 RAB8AP61006 207 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 NEDD8Q15843 81 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 RPS26P11Q5JNZ5 115 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 TMTC4Q5T4D3 741 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 METRNLQ641Q3 311 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 THOC7Q6I9Y2 204 aaKnown RBP12.05□□□□□ -0.48
LIMK1-201ENST00000336180 RNF130Q86XS8 419 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ZDHHC21Q8IVQ6 265 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 DCUN1D3Q8IWE4 304 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 ZZZ3Q8IYH5 903 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 PPCDCQ96CD2 204 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 RHCGQ9UBD6 479 aa12.05□□□□□ -0.48
LIMK1-201ENST00000336180 AGRPO00253 132 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 PLPP1O14494 284 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 DEAF1O75398 565 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-201ENST00000336180 C9P02748 559 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 ALBP02768 609 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 NR4A1P22736 598 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 EPHA2P29317 976 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 SKIV2LQ15477 1246 aaKnown RBP12.04□□□□□ -0.48
LIMK1-201ENST00000336180 ADRM1Q16186 407 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 Q6ZPB1 254 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-201ENST00000336180 ZDHHC13Q8IUH4 622 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 ADGRF3Q8IZF5 1079 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 FBXL6Q8N531 539 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 FAM160A2Q8N612 972 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-201ENST00000336180 HCAR2Q8TDS4 363 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 UBE2FQ969M7 185 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 TESCQ96BS2 214 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 HSH2DQ96JZ2 352 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 SLC35A5Q9BS91 424 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 SLC6A16Q9GZN6 736 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 TRPV4Q9HBA0 871 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 DCAF13Q9NV06 445 aaKnown RBP12.04□□□□□ -0.48
LIMK1-201ENST00000336180 GPATCH2Q9NW75 528 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 TEX10Q9NXF1 929 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-201ENST00000336180 SLCO1B1Q9Y6L6 691 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 SPTBP11277 2137 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 NUP210Q8TEM1 1887 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-201ENST00000336180 RASGRP1O95267 797 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 C5AR1P21730 350 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 KELP23276 732 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 CHI3L1P36222 383 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-201ENST00000336180 ZNF763Q0D2J5 394 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 ADAM15Q13444 863 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 LRIF1Q5T3J3 769 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 GALNT13Q8IUC8 556 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 OR5K2Q8NHB8 316 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 ZFP28Q8NHY6 868 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 SPPL2AQ8TCT8 520 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 SLAMF7Q9NQ25 335 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 CCDC88CQ9P219 2028 aa12.04□□□□□ -0.48
LIMK1-201ENST00000336180 TDRD6O60522 2096 aaKnown RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 PI15O43692 258 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 FOXD2O60548 495 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 CAPNS1P04632 268 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 AGXTP21549 392 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 PRKAG1P54619 331 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 MEP1AQ16819 746 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 VMACQ2NL98 169 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ATG9BQ674R7 924 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ADAMTSL4Q6UY14 1074 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 SPRED1Q7Z699 444 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TMEFF1Q8IYR6 380 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ANKK1Q8NFD2 765 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 OR10G6Q8NH81 332 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 NFKBIDQ8NI38 313 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 SNRNP27Q8WVK2 155 aaKnown RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ELSPBP1Q96BH3 223 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 UGT2B28Q9BY64 529 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TMEM168Q9H0V1 697 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TRIT1Q9H3H1 467 aaKnown RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 PHPT1Q9NRX4 125 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ASIC5Q9NY37 505 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TBC1D29Q9UFV1 150 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 FAF1Q9UNN5 650 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 GPR34Q9UPC5 381 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 MYRFQ9Y2G1 1151 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TMED5Q9Y3A6 229 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 HEATR5BQ9P2D3 2071 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 A0A1W2PPV9 198 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 J3KTA2 159 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 H6PDO95479 791 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 NPPAP01160 153 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 HPCAL1P37235 193 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 SLC5A12Q1EHB4 618 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 SDE2Q6IQ49 451 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 METTL2BQ6P1Q9 378 aaKnown RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 ZNF765Q7L2R6 523 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 WDR53Q7Z5U6 358 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 CALHM3Q86XJ0 350 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 OR52E1Q8NGJ3 308 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 OR1E3Q8WZA6 343 aa12.03□□□□□ -0.48
LIMK1-201ENST00000336180 TCEAL2Q9H3H9 227 aaPredicted RBP12.03□□□□□ -0.48
LIMK1-201ENST00000336180 RIBC2Q9H4K1 309 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms