RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CDK1P06493 297 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 MPC1LP0DKB6 136 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 ITGB8P26012 769 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 SELENOWP63302 87 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 ELP6Q0PNE2 266 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 ST3GAL4Q11206 333 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 CSTF3Q12996 717 aaKnown RBP11.83□□□□□ -0.52
VPS33B-201ENST00000333371 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 PRSS53Q2L4Q9 553 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 LIPJQ5W064 366 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 HEATR4Q86WZ0 1026 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 SLC7A5P1Q8MH63 180 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 MMP21Q8N119 569 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 FIBINQ8TAL6 211 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 SORCS1Q8WY21 1168 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 PAWRQ96IZ0 340 aaKnown RBP11.83□□□□□ -0.52
VPS33B-201ENST00000333371 OR5M11Q96RB7 305 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 CCM2Q9BSQ5 444 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 SIAEQ9HAT2 523 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 WDR37Q9Y2I8 494 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 MAP4K5Q9Y4K4 846 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 PCDHGA2Q9Y5H1 932 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 GPC6Q9Y625 555 aaPredicted RBP11.83□□□□□ -0.52
VPS33B-201ENST00000333371 TRAV19A0A0A6YYK7 116 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 A0A1W2PRU2 124 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 CLCA1A8K7I4 914 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 NPIPB8E9PQR5 432 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 SERPINB1P30740 379 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 AP1S2P56377 157 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 PLEKHS1Q5SXH7 462 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 TPRG1LQ5T0D9 272 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 SLC46A3Q7Z3Q1 461 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 TMPRSS11BQ86T26 416 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 C11orf65Q8NCR3 313 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 NEIL2Q969S2 332 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 RIOK2Q9BVS4 552 aaKnown RBP11.83□□□□□ -0.52
VPS33B-201ENST00000333371 C11orf49Q9H6J7 331 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 ANKMY1Q9P2S6 941 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 SPASTQ9UBP0 616 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 CXCL14O95715 111 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 C8AP07357 584 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 PABPC1P11940 636 aaKnown RBP11.82□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF8P17098 575 aaPredicted RBP11.82□□□□□ -0.52
VPS33B-201ENST00000333371 ALOX12P18054 663 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 IMPA1P29218 277 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 MPPE1Q53F39 396 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 ARMCX4Q5H9R4 360 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 CCDC149Q6ZUS6 474 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 TMEM25Q86YD3 366 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 FAM217AQ8IXS0 508 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 STX19Q8N4C7 294 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 CPA6Q8N4T0 437 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 PARP16Q8N5Y8 322 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF366Q8N895 744 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 KIAA1958Q8N8K9 716 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 ZBP1Q9H171 429 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 MS4A12Q9NXJ0 267 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 PADI2Q9Y2J8 665 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 SNX8Q9Y5X2 465 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 AGRPO00253 132 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 TGFB1P01137 390 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 CTSAP10619 480 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 HOXB6P17509 224 aaKnown RBP11.82□□□□□ -0.52
VPS33B-201ENST00000333371 PCGF2P35227 344 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 TBCEQ15813 527 aaPredicted RBP11.82□□□□□ -0.52
VPS33B-201ENST00000333371 MPEG1Q2M385 716 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 LINC00299Q6ZSB3 139 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 MINDY2Q8NBR6 621 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 B3GNT7Q8NFL0 401 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 WDR48Q8TAF3 677 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 ASZ1Q8WWH4 475 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 PKP4Q99569 1192 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 CORO1BQ9BR76 489 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 SLC35A5Q9BS91 424 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 MMP27Q9H306 513 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 OR51B5Q9H339 312 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 FAM83DQ9H4H8 585 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 TSC22D4Q9Y3Q8 395 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 XIRP2A4UGR9 3374 aa11.82□□□□□ -0.52
VPS33B-201ENST00000333371 MTCL1Q9Y4B5 1905 aaKnown RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 PRAMEF33A0A0G2JMD5 474 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 PRMT3O60678 531 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 PRAMEF10O60809 474 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 OXSR1O95747 527 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 ADH1AP07327 375 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 POU1F1P28069 291 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 NR4A2P43354 598 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 ATAD3BQ5T9A4 648 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 DESI1Q6ICB0 168 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 ZNF605Q86T29 641 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 RNF130Q86XS8 419 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 CYP4Z2PQ8N1L4 340 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 OR4C15Q8NGM1 316 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 CLP1Q92989 425 aaKnown RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 TRIM43Q96BQ3 446 aaPredicted RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 SORBS1Q9BX66 1292 aaKnown RBP11.81□□□□□ -0.52
VPS33B-201ENST00000333371 SPNS1Q9H2V7 528 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 KLHL42Q9P2K6 505 aa11.81□□□□□ -0.52
VPS33B-201ENST00000333371 DUSP12Q9UNI6 340 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms