RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 REXO4Q9GZR2 422 aaKnown RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 MKKSQ9NPJ1 570 aaPredicted RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 OXSMQ9NWU1 459 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 NXT1Q9UKK6 140 aaKnown RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 SEC16AO15027 2179 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 A0A1B0GTL3 188 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 GOLGA6L10A6NI86 522 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 VSTM2BA6NLU5 285 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 TYROBPO43914 113 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 MLYCDO95822 493 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 RECKO95980 971 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 TGFB1P01137 390 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 UMODP07911 640 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 ZGLP1P0C6A0 271 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 PLA2G16P53816 162 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 NAGLUP54802 743 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 DNAJB13P59910 316 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 OLR1P78380 273 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 PHEXP78562 749 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 LCP2Q13094 533 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 DEFB109BQ30KR1 87 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 ADPRMQ3LIE5 342 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 CFAP157Q5JU67 520 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 LIPMQ5VYY2 423 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 TTC19Q6DKK2 380 aaPredicted RBP15.05■□□□□ -0
CCDC28A-201ENST00000332797 NIPAL1Q6NVV3 410 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 LETMD1Q6P1Q0 360 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 TRIM40Q6P9F5 258 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 OR2L5Q8NG80 312 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 OR5T3Q8NGG3 340 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 OR51Q1Q8NH59 317 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 F2RL3Q96RI0 385 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 ZNF382Q96SR6 550 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 GSTO2Q9H4Y5 243 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 DMRT3Q9NQL9 472 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 C14orf105Q9NVL8 296 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 ADGRE2Q9UHX3 823 aa15.05■□□□□ -0
CCDC28A-201ENST00000332797 IGLV3-12A0A075B6K2 115 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 OR4F21O95013 312 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 SMIM10L1P0DMW3 83 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 H2AFXP16104 143 aaPredicted RBP15.04■□□□□ -0
CCDC28A-201ENST00000332797 PIK3CBP42338 1070 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 XCR1P46094 333 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 BTN3A2P78410 334 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 KLC1Q07866 573 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 GGTA1PQ4G0N0 100 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 TNFAIP8L3Q5GJ75 292 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 FAM219BQ5XKK7 198 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 GPRIN3Q6ZVF9 776 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 RAB43Q86YS6 212 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 ZC3H7AQ8IWR0 971 aaKnown RBP15.04■□□□□ -0
CCDC28A-201ENST00000332797 SHISA5Q8N114 240 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 WDR20Q8TBZ3 569 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 MTFMTQ96DP5 389 aaKnown RBP15.04■□□□□ -0
CCDC28A-201ENST00000332797 CMTM7Q96FZ5 175 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 SMIM10Q96HG1 83 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 MAGEB10Q96LZ2 347 aaPredicted RBP15.04■□□□□ -0
CCDC28A-201ENST00000332797 CRB3Q9BUF7 120 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 STMN4Q9H169 189 aaPredicted RBP15.04■□□□□ -0
CCDC28A-201ENST00000332797 OR51B5Q9H339 312 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 TRPS1Q9UHF7 1281 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 POLHQ9Y253 713 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 STK38LQ9Y2H1 464 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 TSC22D4Q9Y3Q8 395 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 MGAQ8IWI9 3026 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 SCN3AQ9NY46 2000 aa15.04■□□□□ -0
CCDC28A-201ENST00000332797 A0A088AWK7 358 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 MAGEB17A8MXT2 336 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 SAP18O00422 153 aaKnown RBP15.03■□□□□ -0
CCDC28A-201ENST00000332797 ZNF10P21506 573 aaPredicted RBP15.03■□□□□ -0
CCDC28A-201ENST00000332797 ALDH3A1P30838 453 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 CCR10P46092 362 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 NEK2P51955 445 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 RPS13P62277 151 aaKnown RBP15.03■□□□□ -0
CCDC28A-201ENST00000332797 TGM3Q08188 693 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 IFT88Q13099 833 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 SSPNQ14714 243 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 MFSD4BQ5TF39 518 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 KHDRBS2Q5VWX1 349 aaKnown RBP15.03■□□□□ -0
CCDC28A-201ENST00000332797 FRG2Q64ET8 278 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 ABHD17CQ6PCB6 329 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 FRMD7Q6ZUT3 714 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 CHSY3Q70JA7 882 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 CDYL2Q8N8U2 506 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 ADAMTS17Q8TE56 1095 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 PEX11GQ96HA9 241 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 CATSPER2Q96P56 530 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 FRG2BQ96QU4 278 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 MECRQ9BV79 373 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 RBCK1Q9BYM8 510 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 TGIF2Q9GZN2 237 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 ELOVL6Q9H5J4 265 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 COPS7BQ9H9Q2 264 aaPredicted RBP15.03■□□□□ -0
CCDC28A-201ENST00000332797 SSU72Q9NP77 194 aaKnown RBP15.03■□□□□ -0
CCDC28A-201ENST00000332797 ZNF225Q9UK10 706 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 MAN2B2Q9Y2E5 1009 aa15.03■□□□□ -0
CCDC28A-201ENST00000332797 CHST10O43529 356 aa15.02■□□□□ -0
CCDC28A-201ENST00000332797 TRIM13O60858 407 aa15.02■□□□□ -0
CCDC28A-201ENST00000332797 DNAJB6O75190 326 aa15.02■□□□□ -0
CCDC28A-201ENST00000332797 JRKO75564 520 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms