RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 MS4A6EQ96DS6 147 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 OR1F2PQ96R84 312 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 SLC25A23Q9BV35 468 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 TRIM55Q9BYV6 548 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 SEMA4CQ9C0C4 833 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 REXO4Q9GZR2 422 aaKnown RBP13.25□□□□□ -0.29
LIMS1-201ENST00000332345 NOL11Q9H8H0 719 aaKnown RBP13.25□□□□□ -0.29
LIMS1-201ENST00000332345 RAB21Q9UL25 225 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 GRID1Q9ULK0 1009 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 PCDHGA9Q9Y5G4 932 aaKnown RBP13.25□□□□□ -0.29
LIMS1-201ENST00000332345 HS3ST3B1Q9Y662 390 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 ATRXP46100 2492 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 COL6A6A6NMZ7 2263 aa13.25□□□□□ -0.29
LIMS1-201ENST00000332345 A6NL46 340 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 ERI3O43414 337 aaKnown RBP13.24□□□□□ -0.29
LIMS1-201ENST00000332345 CHST10O43529 356 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 DNAJB5O75953 348 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 CLDN9O95484 217 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 PRB1P04280 392 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 SBK3P0C264 359 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 ACPPP15309 386 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 ATP5F1P24539 256 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-201ENST00000332345 ARL1P40616 181 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-201ENST00000332345 ADPRMQ3LIE5 342 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 TUBB8Q3ZCM7 444 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 MINDY4Q4G0A6 757 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 TMEM35AQ53FP2 167 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 LACTB2Q53H82 288 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-201ENST00000332345 TRIM40Q6P9F5 258 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 SLC22A9Q8IVM8 553 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 TMEM151BQ8IW70 566 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 CYP4X1Q8N118 509 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 L3MBTL4Q8NA19 623 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 OR2L5Q8NG80 312 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 OR11G2Q8NGC1 345 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 TBC1D20Q96BZ9 403 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 CMTM7Q96FZ5 175 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 PEX11GQ96HA9 241 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 MAGEB10Q96LZ2 347 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-201ENST00000332345 NTMT1Q9BV86 223 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 NPLQ9BXD5 320 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-201ENST00000332345 ZNF71Q9NQZ8 489 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-201ENST00000332345 FBXL4Q9UKA2 621 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 PCTPQ9UKL6 214 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 PCDHGB7Q9Y5F8 929 aa13.24□□□□□ -0.29
LIMS1-201ENST00000332345 ZNF860A6NHJ4 632 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 A8MT66 165 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 H0YIV9 168 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 PSMD12O00232 456 aaPredicted RBP13.23□□□□□ -0.29
LIMS1-201ENST00000332345 GLRA3O75311 464 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 ALOX12BO75342 701 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 JRKO75564 520 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 CEACAM4O75871 244 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 B3GALT4O96024 378 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 C8orf89P0DMQ9 161 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 RNH1P13489 461 aaKnown RBP13.23□□□□□ -0.29
LIMS1-201ENST00000332345 KRT4P19013 534 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 JAK1P23458 1154 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 HNRNPH1P31943 449 aaKnown RBP13.23□□□□□ -0.29
LIMS1-201ENST00000332345 CRHR1P34998 444 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 PIK3CBP42338 1070 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 PGDP52209 483 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 PLA2G16P53816 162 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 SOX8P57073 446 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 PHEXP78562 749 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 CPSF6Q16630 551 aaKnown RBP eCLIP13.23□□□□□ -0.29
LIMS1-201ENST00000332345 CCDC153Q494R4 210 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 IRAK1BP1Q5VVH5 260 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 FAAH2Q6GMR7 532 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 TMEM205Q6UW68 189 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 SH2D5Q6ZV89 423 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 NDUFAF7Q7L592 441 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 VN1R5Q7Z5H4 357 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 MILR1Q7Z6M3 343 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 GALNT16Q8N428 558 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 ZNF843Q8N446 348 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 MREGQ8N565 214 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 PLPP5Q8NEB5 264 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 OR5T3Q8NGG3 340 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 OR2W6PQ8NHA6 318 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 PPP4R1Q8TF05 950 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 ZNF473Q8WTR7 871 aaKnown RBP13.23□□□□□ -0.29
LIMS1-201ENST00000332345 CCDC126Q96EE4 140 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 KCNC2Q96PR1 638 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 F2RL3Q96RI0 385 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 CENPKQ9BS16 269 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 C1QTNF3Q9BXJ4 246 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 ROGDIQ9GZN7 287 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 VN1R1Q9GZP7 353 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
LIMS1-201ENST00000332345 PSD3Q9NYI0 1048 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 GPR83Q9NYM4 423 aa13.23□□□□□ -0.29
LIMS1-201ENST00000332345 C19orf25Q9UFG5 118 aaPredicted RBP13.23□□□□□ -0.29
LIMS1-201ENST00000332345 NSG1A0A0A6YYJ2 146 aa13.22□□□□□ -0.29
LIMS1-201ENST00000332345 B8ZZF3 427 aa13.22□□□□□ -0.29
LIMS1-201ENST00000332345 COPEO14579 308 aa13.22□□□□□ -0.29
LIMS1-201ENST00000332345 OR7A17O14581 309 aa13.22□□□□□ -0.29
LIMS1-201ENST00000332345 B3GALT2O43825 422 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms