RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 NLE1Q9NVX2 485 aaPredicted RBP13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 BFARQ9NZS9 450 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 SLC39A10Q9ULF5 831 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 EIF3LQ9Y262 564 aaKnown RBP13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 TRBV5-4A0A0C4DH59 114 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 PINLYPA6NC86 204 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 CD5LO43866 347 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 VPS26AO75436 327 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 FTH1P02794 183 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 TUBB4AP04350 444 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 RPN2P04844 631 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 ETS1P14921 441 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 MC4RP32245 332 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 XCR1P46094 333 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 AVPR1BP47901 424 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 KCNJ1P48048 391 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 GNG11P61952 73 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 TNK1Q13470 666 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 FAM53BQ14153 422 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 NSDHLQ15738 373 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 ACKR1Q16570 336 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 POMZP3Q6PJE2 187 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 SLC22A16Q86VW1 577 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 PRELID2Q8N945 189 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 PPHLN1Q8NEY8 458 aaKnown RBP13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 OR51Q1Q8NH59 317 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 ACTRT1Q8TDG2 376 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 KIAA1191Q96A73 305 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 SARAFQ96BY9 339 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 DNAJC1Q96KC8 554 aaKnown RBP13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 TIMMDC1Q9NPL8 285 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 ZNF629Q9UEG4 869 aaPredicted RBP13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 SNX12Q9UMY4 172 aa13.73□□□□□ -0.21
CTHRC1-201ENST00000330295 MGAM2Q2M2H8 2515 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 H0YIG0 161 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 H7C0S8 307 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 SOX30O94993 753 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 ZSCAN5DPP0CG00 497 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 HOXB1P14653 301 aaPredicted RBP13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 NPY2RP49146 381 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 MSLNQ13421 630 aaPredicted RBP13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 ABRAXAS2Q15018 415 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 CCDC38Q502W7 563 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 BHLHB9Q6PI77 547 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 MAATS1Q7Z4T9 603 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 ARMC10Q8N2F6 343 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 OR2A1Q8NGT9 310 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 OR9A4Q8NGU2 314 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 ROBO4Q8WZ75 1007 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 PEX13Q92968 403 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 DPH7Q9BTV6 452 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 RAB11FIP5Q9BXF6 653 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 TTTY12Q9BZ98 90 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 UBTD1Q9HAC8 227 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 PIH1D1Q9NWS0 290 aaKnown RBP13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 RIMKLBQ9ULI2 386 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 PRSS21Q9Y6M0 314 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 CR1P17927 2039 aa13.72□□□□□ -0.21
CTHRC1-201ENST00000330295 FEZF1A0PJY2 475 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 CTAGE9A4FU28 777 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 MROH6A6NGR9 719 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 CCL22O00626 93 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 SUSD5O60279 629 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 PHF2O75151 1096 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 KRT14P02533 472 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 PRSS56P0CW18 603 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 CEACAM8P31997 349 aaPredicted RBP13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 MAN2A2P49641 1150 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 CSE1LP55060 971 aaKnown RBP13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 OR4D2P58180 307 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 SNRPNP63162 240 aaKnown RBP13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 PRAMEP78395 509 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 GPS1Q13098 491 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 NAA25Q14CX7 972 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 PCID2Q5JVF3 399 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 CCDC137Q6PK04 289 aaKnown RBP13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 AFTPHQ6ULP2 937 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 MICALCLQ6ZW33 695 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 PCGF5Q86SE9 256 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 FAM109AQ8N4B1 249 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 TMEM156Q8N614 296 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 MEIOBQ8N635 442 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 PSD4Q8NDX1 1056 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 TNIP2Q8NFZ5 429 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 OR2M7Q8NG81 312 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 CFAP61Q8NHU2 1237 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 MS4A14Q96JA4 679 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 IL22Q9GZX6 179 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 SMARCAL1Q9NZC9 954 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 ANAPC5Q9UJX4 755 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 HEATR5BQ9P2D3 2071 aa13.71□□□□□ -0.21
CTHRC1-201ENST00000330295 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 SH3D21A4FU49 640 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 RNF223E7ERA6 249 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 TXNDC9O14530 226 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 GLSO94925 669 aaPredicted RBP13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 TPSB2P20231 275 aa13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 COILP38432 576 aaPredicted RBP13.7□□□□□ -0.22
CTHRC1-201ENST00000330295 PAFAH1B1P43034 410 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms