RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 RAD1O60671 282 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 GALR3O60755 368 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 KLHL18O94889 574 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SBK3P0C264 359 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SMIM10L1P0DMW3 83 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 NR2F6P10588 404 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 FOLR3P41439 243 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 MAPK12P53778 367 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 GFERP55789 205 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 FOXM1Q08050 763 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 FASTKQ14296 549 aaKnown RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 TBC1D25Q3MII6 688 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ABHD17CQ6PCB6 329 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 DHRS13Q6UX07 377 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 USP53Q70EK8 1073 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 DSELQ8IZU8 1212 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CDYL2Q8N8U2 506 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 BMPERQ8N8U9 685 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 PLPP5Q8NEB5 264 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SFXN5Q8TD22 340 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CHTF18Q8WVB6 975 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 THAP4Q8WY91 577 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SMIM10Q96HG1 83 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 OR6C1Q96RD1 312 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SH3GL1Q99961 368 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ACTL8Q9H568 366 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CACYBPQ9HB71 228 aaKnown RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 FAM120CQ9NX05 1096 aaKnown RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 FAM53CQ9NYF3 392 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 PISDQ9UG56 409 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 MRTO4Q9UKD2 239 aaKnown RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 PCDHGB4Q9UN71 923 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 IGHV5-51A0A0C4DH38 117 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 A0A1W2PQ72 361 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 LRIT2A6NDA9 550 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ERI3O43414 337 aaKnown RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 DNAJA2O60884 412 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ATP5HO75947 161 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ADRB1P08588 477 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 CSNK2A2P19784 350 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 HIST1H1TP22492 207 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 RORAP35398 523 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ARFIP2P53365 341 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 TAS2R50P59544 299 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 DCAF7P61962 342 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 PLIN5Q00G26 463 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 GNA13Q14344 377 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 CPSF6Q16630 551 aaKnown RBP eCLIP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 XKR7Q5GH72 579 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 CCNYL2Q5T2Q4 361 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 GKAP1Q5VSY0 366 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 FBXO42Q6P3S6 717 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ZCCHC12Q6PEW1 402 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 NAPRTQ6XQN6 538 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 OVCH1Q7RTY7 1134 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ALYREFQ86V81 257 aaKnown RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ABCA7Q8IZY2 2146 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 OR7G1Q8NGA0 311 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 OR2I1PQ8NGU4 316 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 OR14A16Q8NHC5 309 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 HUS1BQ8NHY5 278 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 CREB3L4Q8TEY5 395 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 PMM1Q92871 262 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 RIT1Q92963 219 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 TUBGCP3Q96CW5 907 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 SPATA9Q9BWV2 254 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 EPN3Q9H201 632 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 NEUROD4Q9HD90 331 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 FSCN3Q9NQT6 498 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ACSS1Q9NUB1 689 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 TAS2R7Q9NYW3 318 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 IFT80Q9P2H3 777 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ARL2BPQ9Y2Y0 163 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 PCDHGB3Q9Y5G1 929 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF780BQ9Y6R6 833 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 NCOR1O75376 2440 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 CDRT15L2A8MXV6 281 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 PCDH7O60245 1069 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 AK1P00568 194 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 CPN2P22792 545 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 GCGRP47871 477 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 GNGT1P63211 74 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 TNFRSF17Q02223 184 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 KLC1Q07866 573 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 MLC1Q15049 377 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 CCSMST1Q4G0I0 132 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 NKAIN1Q4KMZ8 207 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 SNAP47Q5SQN1 464 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 FAM91A1Q658Y4 838 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 CAMKMTQ7Z624 323 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 C10orf67Q8IYJ2 551 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 MIER2Q8N344 545 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 UTP15Q8TED0 518 aaKnown RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 DAZLQ92904 295 aaKnown RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 COL26A1Q96A83 441 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 MIEF2Q96C03 454 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 MS4A6EQ96DS6 147 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ZBED6CLQ96FA7 236 aaPredicted RBP4.91□□□□□ -1.62
LRIT3-201ENST00000327908 ACAT2Q9BWD1 397 aa4.91□□□□□ -1.62
LRIT3-201ENST00000327908 BHLHE41Q9C0J9 482 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms