RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 PAQR7Q86WK9 346 aa17.57■□□□□ 0.4
USP39-201ENST00000323701 TM4SF18Q96CE8 201 aa17.57■□□□□ 0.4
USP39-201ENST00000323701 GBP5Q96PP8 586 aa17.57■□□□□ 0.4
USP39-201ENST00000323701 C5AR2Q9P296 337 aa17.57■□□□□ 0.4
USP39-201ENST00000323701 AP4S1Q9Y587 144 aa17.57■□□□□ 0.4
USP39-201ENST00000323701 PCDHB3Q9Y5E6 796 aa17.57■□□□□ 0.4
USP39-201ENST00000323701 PCDHGA4Q9Y5G9 962 aa17.57■□□□□ 0.4
USP39-201ENST00000323701 GSAPA4D1B5 854 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 CSF2P04141 144 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 CSNK1EP49674 416 aaKnown RBP17.56■□□□□ 0.4
USP39-201ENST00000323701 RACK1P63244 317 aaKnown RBP17.56■□□□□ 0.4
USP39-201ENST00000323701 TRIP10Q15642 601 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 ZNF621Q6ZSS3 439 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 VN1R4Q7Z5H5 301 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 TMEM102Q8N9M5 508 aaPredicted RBP17.56■□□□□ 0.4
USP39-201ENST00000323701 OR2T12Q8NG77 320 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 PNPT1Q8TCS8 783 aaKnown RBP17.56■□□□□ 0.4
USP39-201ENST00000323701 ZDHHC1Q8WTX9 485 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 LRTOMTQ8WZ04 291 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 CCDC115Q96NT0 180 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 TEX10Q9NXF1 929 aaPredicted RBP17.56■□□□□ 0.4
USP39-201ENST00000323701 DLGAP2Q9P1A6 1054 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 AP1M2Q9Y6Q5 423 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 ZDBF2Q9HCK1 2354 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 WASHC1A8K0Z3 465 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 KDM1AO60341 852 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 CTSVO60911 334 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 PVRP15151 417 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 PCSK2P16519 638 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 FBXO42Q6P3S6 717 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 CALHM3Q86XJ0 350 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 MS4A6EQ96DS6 147 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 DUS3LQ96G46 650 aaKnown RBP17.56■□□□□ 0.4
USP39-201ENST00000323701 SARGQ9BW04 601 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 POT1Q9NUX5 634 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 ACTR10Q9NZ32 417 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 SPASTQ9UBP0 616 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 V9GYQ6 96 aa17.56■□□□□ 0.4
USP39-201ENST00000323701 ABCB1P08183 1280 aaPredicted RBP17.55■□□□□ 0.4
USP39-201ENST00000323701 NME1P15531 152 aaKnown RBP17.55■□□□□ 0.4
USP39-201ENST00000323701 SERPINB1P30740 379 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 SLC7A1P30825 629 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 GRK3P35626 688 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 TRPC1P48995 793 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 MAPK12P53778 367 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 MAZP56270 477 aaKnown RBP17.55■□□□□ 0.4
USP39-201ENST00000323701 HBA1P69905 142 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 C16orf72Q14CZ0 275 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 FCRL6Q6DN72 434 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 GLYATQ6IB77 296 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 HMBOX1Q6NT76 420 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 TICAM1Q8IUC6 712 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 ADGRG5Q8IZF4 528 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 RGMAQ96B86 450 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 SLC6A16Q9GZN6 736 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 SEMA6AQ9H2E6 1030 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 KIR2DS5A0A0G2JLQ3 304 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 A0A0G2JNG1 304 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 C1orf226A1L170 272 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 AQP12BA6NM10 295 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 EIF4E1BA6NMX2 242 aaKnown RBP17.55■□□□□ 0.4
USP39-201ENST00000323701 KIR2DS3K7RE56 304 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 CASQ2O14958 399 aaPredicted RBP17.55■□□□□ 0.4
USP39-201ENST00000323701 CAPN5O15484 640 aaPredicted RBP17.55■□□□□ 0.4
USP39-201ENST00000323701 SH3BP5O60239 455 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 TIPRLO75663 272 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 ENGP17813 658 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 GGT1P19440 569 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 BLKP51451 505 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 KIR2DS3Q14952 304 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 KIR2DS5Q14953 304 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 ADPRMQ3LIE5 342 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 GPR155Q7Z3F1 870 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 AQP12AQ8IXF9 295 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 FAM86B1Q8N7N1 296 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 KCT2Q8NC54 265 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 RSC1A1Q92681 617 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 PPCDCQ96CD2 204 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 TRAPPC9Q96Q05 1148 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 TRIM4Q9C037 500 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 AHSPQ9NZD4 102 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 THEGQ9P2T0 379 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 SNX7Q9UNH6 387 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 AURKCQ9UQB9 309 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 SNX11Q9Y5W9 270 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 AK5Q9Y6K8 562 aa17.55■□□□□ 0.4
USP39-201ENST00000323701 DHRS12A0PJE2 317 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 CLIC1O00299 241 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 ERI3O43414 337 aaKnown RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 SDC3O75056 442 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 PRKRAO75569 313 aaKnown RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 C6orf47O95873 294 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 TYRP1P17643 537 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 HHEXQ03014 270 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 CYP51A1Q16850 503 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 SFT2D3Q587I9 215 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 CWF19L1Q69YN2 538 aaKnown RBP17.54■□□□□ 0.4
USP39-201ENST00000323701 OR4C11Q6IEV9 310 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 IZUMO2Q6UXV1 221 aa17.54■□□□□ 0.4
USP39-201ENST00000323701 MFSD9Q8NBP5 474 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms