RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 MREGQ8N565 214 aa17.7■□□□□ 0.42
CIRBP-201ENST00000320936 TMEM102Q8N9M5 508 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-201ENST00000320936 CLEC1AQ8NC01 280 aa17.7■□□□□ 0.42
CIRBP-201ENST00000320936 C9orf43Q8TAL5 461 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-201ENST00000320936 REPS1Q96D71 796 aa17.7■□□□□ 0.42
CIRBP-201ENST00000320936 FER1L6-AS2Q96M78 137 aa17.7■□□□□ 0.42
CIRBP-201ENST00000320936 CDK15Q96Q40 435 aa17.7■□□□□ 0.42
CIRBP-201ENST00000320936 TGIF2Q9GZN2 237 aa17.7■□□□□ 0.42
CIRBP-201ENST00000320936 REXO4Q9GZR2 422 aaKnown RBP17.7■□□□□ 0.42
CIRBP-201ENST00000320936 IQCGQ9H095 443 aaKnown RBP17.7■□□□□ 0.42
CIRBP-201ENST00000320936 RHBGQ9H310 441 aa17.7■□□□□ 0.42
CIRBP-201ENST00000320936 G3BP2Q9UN86 482 aaKnown RBP17.7■□□□□ 0.42
CIRBP-201ENST00000320936 HS3ST3B1Q9Y662 390 aa17.7■□□□□ 0.42
CIRBP-201ENST00000320936 AGPSO00116 658 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 PSMD12O00232 456 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 UGDHO60701 494 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 CDC123O75794 336 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 BMP10O95393 424 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 CLDN9O95484 217 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 PRB1P04280 392 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 MYL2P10916 166 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 ATP5F1P24539 256 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 SERPINB1P30740 379 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 HERVK_113P63132 956 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 EEF1A2Q05639 463 aaKnown RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 TUBB8Q3ZCM7 444 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 RPS27LQ71UM5 84 aaKnown RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 APLFQ8IW19 511 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 SRRM1Q8IYB3 904 aaKnown RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 OR2L5Q8NG80 312 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 OR7G3Q8NG95 312 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 OR52B6Q8NGF0 335 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 METTL21AQ8WXB1 218 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 MS4A6EQ96DS6 147 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 F2RL3Q96RI0 385 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 ERVK-6Q9BXR3 956 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 ROPN1BQ9BZX4 212 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 ROPN1Q9HAT0 212 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-201ENST00000320936 RNF11Q9Y3C5 154 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 PCDHGA11Q9Y5H2 935 aa17.69■□□□□ 0.42
CIRBP-201ENST00000320936 C4orf51C9J302 202 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 SOCS6O14544 535 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 OR7A17O14581 309 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 CHST10O43529 356 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 DLX3O60479 287 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 ALOX12BO75342 701 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 SUPT7LO94864 414 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 RPS17P08708 135 aaKnown RBP17.68■□□□□ 0.42
CIRBP-201ENST00000320936 TSPAN8P19075 237 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 RAPSNQ13702 412 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 KRT71Q3SY84 523 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 DCAF10Q5QP82 559 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 TTC19Q6DKK2 380 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-201ENST00000320936 SLC22A9Q8IVM8 553 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 LAS2Q8IYD9 372 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 TMEM151AQ8N4L1 468 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 HUS1BQ8NHY5 278 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 C8orf44Q96CB5 159 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 MTERF1Q99551 399 aaKnown RBP17.68■□□□□ 0.42
CIRBP-201ENST00000320936 CENPKQ9BS16 269 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 MS4A8Q9BY19 250 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 SEMA4CQ9C0C4 833 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 AICDAQ9GZX7 198 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 ZNF71Q9NQZ8 489 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-201ENST00000320936 LGALS13Q9UHV8 139 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 ADGRE2Q9UHX3 823 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 TUBD1Q9UJT1 453 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 GRID1Q9ULK0 1009 aa17.68■□□□□ 0.42
CIRBP-201ENST00000320936 MED13Q9UHV7 2174 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 TLN1Q9Y490 2541 aaKnown RBP17.67■□□□□ 0.42
CIRBP-201ENST00000320936 SAP18O00422 153 aaKnown RBP17.67■□□□□ 0.42
CIRBP-201ENST00000320936 B3GALT2O43825 422 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 ERLIN1O75477 346 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 OTCP00480 354 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 TGFB1P01137 390 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 C8orf89P0DMQ9 161 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 RNH1P13489 461 aaKnown RBP17.67■□□□□ 0.42
CIRBP-201ENST00000320936 CRHR1P34998 444 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 RAP1GDS1P52306 607 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 CDH13P55290 713 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 PCDH1Q08174 1060 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 E2F2Q14209 437 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 ZRSR2Q15696 482 aaKnown RBP17.67■□□□□ 0.42
CIRBP-201ENST00000320936 CCDC153Q494R4 210 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 KIRREL2Q6UWL6 708 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 CHSY3Q70JA7 882 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 SHISA5Q8N114 240 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 RNF175Q8N4F7 328 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 CCNYL1Q8N7R7 359 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 TRPC4APQ8TEL6 797 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 ZNF483Q8TF39 744 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-201ENST00000320936 ZNF473Q8WTR7 871 aaKnown RBP17.67■□□□□ 0.42
CIRBP-201ENST00000320936 NACC2Q96BF6 587 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 TBC1D20Q96BZ9 403 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 CMTM7Q96FZ5 175 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 ABHD17AQ96GS6 310 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 TMEM237Q96Q45 408 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 OR1F2PQ96R84 312 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 SLC25A23Q9BV35 468 aa17.67■□□□□ 0.42
CIRBP-201ENST00000320936 VN1R1Q9GZP7 353 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms