RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 NUMA1Q14980 2115 aa14.96□□□□□ -0.02
SHROOM1-201ENST00000319854 LOC105371267A0A1B0GV96 52 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 ITGAMP11215 1152 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 VIPR1P32241 457 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 PFN3P60673 137 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 IER5LQ5T953 404 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 NOXRED1Q6NXP6 359 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 THOC6Q86W42 341 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 UBQLNLQ8IYU4 475 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 BADQ92934 168 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 SLC38A4Q969I6 547 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 CCDC115Q96NT0 180 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 DEPDC7Q96QD5 511 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 CPEB1Q9BZB8 566 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 IL36AQ9UHA7 158 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 OBSL1O75147 1896 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 hCG_2039718K7EN88 272 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 C8GP07360 202 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 LINC00271P0C7V0 271 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 COX7A2P14406 83 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 DOC2AQ14183 400 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 IRF3Q14653 427 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 ZFP69Q49AA0 526 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 TUBA3EQ6PEY2 450 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 OR2AG1Q9H205 316 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 AMBNQ9NP70 447 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 CCDC177Q9NQR7 707 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 ORC6Q9Y5N6 252 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 GMPPBQ9Y5P6 360 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 LOC100506127A0A0U1RQW1 187 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 SGTAO43765 313 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 ICMTO60725 284 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 WBP4O75554 376 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 CREG1O75629 220 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 RECQL5O94762 991 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 ETHE1O95571 254 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 FGBP02675 491 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 SLC6A11P48066 632 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 CRISP3P54108 245 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 IL18R1Q13478 541 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 AGTRAPQ6RW13 159 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 NRARPQ7Z6K4 114 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 TMPRSS11BQ86T26 416 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 CADM2Q8N3J6 435 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 OR8J3Q8NGG0 315 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 NXPE3Q969Y0 559 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 Q96MT0 163 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 SGK2Q9HBY8 427 aa14.95□□□□□ -0.02
SHROOM1-201ENST00000319854 GNG14A0A1W2PPG7 69 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 CBSLP0DN79 551 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 CYP2A6P11509 494 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 HOXA9P31269 272 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 CBSP35520 551 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 P2RX3P56373 397 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 TMEM115Q12893 351 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 HKDC1Q2TB90 917 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 RUNDC3AQ59EK9 446 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 ZC3H12BQ5HYM0 836 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 CPZQ66K79 652 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 CAPN13Q6MZZ7 669 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 BRAT1Q6PJG6 821 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 TP53I13Q8NBR0 393 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 ZNF784Q8NCA9 323 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 SH3KBP1Q96B97 665 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 SAMD11Q96NU1 681 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 IRF2BPLQ9H1B7 796 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 OR51E2Q9H255 320 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 SERHLQ9NQF3 203 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 DCAF13Q9NV06 445 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 SH3BP4Q9P0V3 963 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 BTBD3Q9Y2F9 522 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 CFAP20Q9Y6A4 193 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 SPEGQ15772 3267 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 CENPXA8MT69 81 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 MAGEB17A8MXT2 336 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 ARHGEF15O94989 841 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 KIR3DL1P43629 444 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 DGKGP49619 791 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 MAD2L1BPQ15013 274 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 PARS2Q7L3T8 475 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 ZNF551Q7Z340 670 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 TRMT11Q7Z4G4 463 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 VTCN1Q7Z7D3 282 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 SIGLEC11Q96RL6 698 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 PLAGL1Q9UM63 463 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 ABCG2Q9UNQ0 655 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 RNF6Q9Y252 685 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 INSL6Q9Y581 213 aa14.94□□□□□ -0.02
SHROOM1-201ENST00000319854 H3BQ06 376 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 PCDHGA12O60330 932 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 FKBP9O95302 570 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 CRYZL1O95825 349 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 CREMQ03060 361 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 ACSM2AQ08AH3 577 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 DHCR24Q15392 516 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 WDR45BQ5MNZ6 344 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 ACSM2BQ68CK6 577 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 ZNF544Q6NX49 715 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 LRRC70Q7Z2Q7 622 aa14.93□□□□□ -0.02
SHROOM1-201ENST00000319854 TMEM132CQ8N3T6 1108 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms