RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SYNGR4O95473 234 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 C2orf73Q8N5S3 287 aaPredicted RBP15□□□□□ -0.01
HCFC1-201ENST00000310441 PRODH2Q9UF12 536 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 FRKP42685 505 aaPredicted RBP15□□□□□ -0.01
HCFC1-201ENST00000310441 PIGGQ5H8A4 983 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 NKAPLQ5M9Q1 402 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 TPGS2Q68CL5 300 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 NPAS4Q8IUM7 802 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 TMEM156Q8N614 296 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 OR2T33Q8NG76 320 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 MAELQ96JY0 434 aaKnown RBP15□□□□□ -0.01
HCFC1-201ENST00000310441 GPRC5BQ9NZH0 403 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 AARDQ4LEZ3 155 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 NEIL3Q8TAT5 605 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 TBX5Q99593 518 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 SLC28A3Q9HAS3 691 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 TISP43B9A030 160 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 RPP14O95059 124 aaKnown RBP14.99□□□□□ -0.01
HCFC1-201ENST00000310441 SCAF4O95104 1147 aaKnown RBP14.99□□□□□ -0.01
HCFC1-201ENST00000310441 AOC1P19801 751 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 PRKXP51817 358 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 ESPL1Q14674 2120 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 GKN2Q86XP6 184 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 GNPDA2Q8TDQ7 276 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 MRI1Q9BV20 369 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 FAM86C1Q9NVL1 165 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 DHDHQ9UQ10 334 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 TRBC2A0A5B9 178 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 RAC2P15153 192 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 FUT10Q6P4F1 479 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 ACBD4Q8NC06 268 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 OR5B17Q8NGF7 314 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 TSPEARQ8WU66 669 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 MTG2Q9H4K7 406 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 NDUFAF4Q9P032 175 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 TSTD3H0UI37 97 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 ADAP2Q9NPF8 381 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 PCDHA2Q9Y5H9 948 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 CYB5BO43169 146 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 RBBP9O75884 186 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 ABHD18Q0P651 414 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 TCTEX1D2Q8WW35 142 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 ACP6Q9NPH0 428 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 KLF15Q9UIH9 416 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 HRH2P25021 359 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 PER3P56645 1201 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 LRRC32Q14392 662 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 KANK2Q63ZY3 851 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 FAM110BQ8TC76 370 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 GATA5Q9BWX5 397 aaPredicted RBP14.99□□□□□ -0.01
HCFC1-201ENST00000310441 RETREG1Q9H6L5 497 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 PARPBPQ9NWS1 579 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 EVLQ9UI08 416 aaPredicted RBP14.99□□□□□ -0.01
HCFC1-201ENST00000310441 SERTAD3Q9UJW9 196 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 BCHEP06276 602 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 SFTPBP07988 381 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 PRKCHP24723 683 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 HS3ST5Q8IZT8 346 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 TMBIM1Q969X1 311 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 ALPK1Q96QP1 1244 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 GJE1A6NN92 205 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 LPLP06858 475 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 ZNF267Q14586 743 aaPredicted RBP14.99□□□□□ -0.01
HCFC1-201ENST00000310441 LNX2Q8N448 690 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 SAMD12Q8N8I0 201 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 CCDC71LQ8N9Z2 235 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 TM9SF4Q92544 642 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 SLCO2A1Q92959 643 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 GAL3ST1Q99999 423 aa14.99□□□□□ -0.01
HCFC1-201ENST00000310441 HPRP00739 348 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 CREB5Q02930 508 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 ZNF572Q7Z3I7 529 aaPredicted RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 NSMAFQ92636 917 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 PKP4Q99569 1192 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 CCDC32Q9BV29 185 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 OR2AG1Q9H205 316 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 MON2Q7Z3U7 1717 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 TRAPPC6AO75865 159 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 THBS2P35442 1172 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 PDSS2Q86YH6 399 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 PGAP3Q96FM1 320 aaPredicted RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 TP53I11O14683 189 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 KLF11O14901 512 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 RGS9O75916 674 aaPredicted RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 OC90Q02509 493 aaPredicted RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 SLC9B2Q86UD5 537 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 TOR1AIP2Q8NFQ8 470 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 NTAN1Q96AB6 310 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 PHOX2BQ99453 314 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 NIFKQ9BYG3 293 aaKnown RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 SLC34A2O95436 690 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 AMY2BP19961 511 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 PSPHP78330 225 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 CDK6Q00534 326 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 RHDQ02161 417 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 GRIK5Q16478 980 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 UGT2A3Q6UWM9 527 aa14.98□□□□□ -0.01
HCFC1-201ENST00000310441 C15orf52Q6ZUT6 534 aaKnown RBP14.98□□□□□ -0.01
HCFC1-201ENST00000310441 SMPDL3AQ92484 453 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms