RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OLIG2Q13516 323 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ATP6AP1Q15904 470 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 RNF151Q2KHN1 245 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 UGT3A2Q3SY77 523 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SLC36A3Q495N2 470 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ZMAT1Q5H9K5 638 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 MTX3Q5HYI7 312 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF678Q5SXM1 525 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 FAM182AQ5T1J6 154 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 C9orf64Q5T6V5 341 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 HECTD2Q5U5R9 776 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 PIK3R6Q5UE93 754 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 KIAA0895LQ68EN5 471 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF470Q6ECI4 717 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 HMBOX1Q6NT76 420 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 KDELC1Q6UW63 502 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ABRAXAS1Q6UWZ7 409 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 Q6ZNX1 250 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 AMIGO2Q86SJ2 522 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 PATL1Q86TB9 770 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 GPR180Q86V85 440 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 DENND6AQ8IWF6 608 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 UMODL1-AS1Q8N2C9 162 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 MIER2Q8N344 545 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 EID2Q8N6I1 236 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 PCDH20Q8N6Y1 951 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 WDR48Q8TAF3 677 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 FNDC8Q8TC99 324 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 AGR3Q8TD06 166 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 DQX1Q8TE96 717 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 BORCS5Q969J3 196 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 TADA1Q96BN2 335 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 C19orf60Q96EN9 201 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 IMP4Q96G21 291 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 RDH12Q96NR8 316 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ELF4Q99607 663 aaPredicted RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SLC29A1Q99808 456 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 FICDQ9BVA6 458 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 FSD1LQ9BXM9 530 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ERVK-6Q9BXR3 956 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 BTBD1Q9H0C5 482 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 TKTL2Q9H0I9 626 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 TFB2MQ9H5Q4 396 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SGK2Q9HBY8 427 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ANLNQ9NQW6 1124 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SDR39U1Q9NRG7 319 aaPredicted RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 GPR27Q9NS67 375 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 ABCC13Q9NSE7 274 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 DDX18Q9NVP1 670 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 FAIMQ9NVQ4 179 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 RBM22Q9NW64 420 aaKnown RBP eCLIP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 FBXL12Q9NXK8 326 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 COX16Q9P0S2 106 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SLCO3A1Q9UIG8 710 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 G3BP2Q9UN86 482 aaKnown RBP4.73□□□□□ -1.65
CKS1B-201ENST00000308987 NEU3Q9UQ49 428 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 CA5BQ9Y2D0 317 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 VWA7Q9Y334 891 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 PCDHB1Q9Y5F3 818 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 PCDHGA1Q9Y5H4 931 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SLC30A1Q9Y6M5 507 aa4.73□□□□□ -1.65
CKS1B-201ENST00000308987 SDK2Q58EX2 2172 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 LY6G6EA0A0G2JKS1 128 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 A0A1W2PP18 115 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PMS2P1A4D2B8 440 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TTC34A8MYJ7 566 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TMEM233B4DJY2 109 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 UBXN8O00124 270 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 FXYD1O00168 92 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 NME4O00746 187 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 DLGAP1O14490 977 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 AZIN1O14977 448 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ANGPT2O15123 496 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CLOCKO15516 846 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 LATO43561 262 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 TBL1XO60907 577 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SUPT7LO94864 414 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 ESRRBO95718 433 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 LDOC1O95751 146 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 HPRP00739 348 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 EPOP01588 193 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PRR35P0CG20 571 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 MYF5P13349 255 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 GFAPP14136 432 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CD1EP15812 388 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 LBPP18428 481 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 OGNP20774 298 aaKnown RBP4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SAT1P21673 171 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 BMP5P22003 454 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 FDXRP22570 491 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 VAMP1P23763 118 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 SLC6A2P23975 617 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PSMA3P25788 255 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 HTR1EP28566 365 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CD38P28907 300 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 PCSK6P29122 969 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 DRD3P35462 400 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 CAPGP40121 348 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 GRIA3P42263 894 aa4.72□□□□□ -1.65
CKS1B-201ENST00000308987 MAGEA8P43361 318 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms