RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 IQCKQ8N0W5 287 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 AFAP1L2Q8N4X5 818 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 AMER3Q8N944 861 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR2L5Q8NG80 312 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR4F6Q8NGB9 312 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR51Q1Q8NH59 317 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 HUS1BQ8NHY5 278 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TCP10LQ8TDR4 215 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZNF473Q8WTR7 871 aaKnown RBP10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MS4A6EQ96DS6 147 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CMTM7Q96FZ5 175 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KCNC2Q96PR1 638 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SPSB2Q99619 263 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MS4A8Q9BY19 250 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ROGDIQ9GZN7 287 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KLHL31Q9H511 634 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ELOVL6Q9H5J4 265 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZBTB26Q9HCK0 441 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 DMRT3Q9NQL9 472 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SEMA3GQ9NS98 782 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TRPS1Q9UHF7 1281 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZNF490Q9ULM2 529 aaPredicted RBP10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SNX6Q9UNH7 406 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RNF11Q9Y3C5 154 aa10.42□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 IGLV3-12A0A075B6K2 115 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 A0A0G2JN53 185 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 LRIT2A6NDA9 550 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 H3BQF6 201 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ERVH48-1M5A8F1 160 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 B3GALT2O43825 422 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CNOT3O75175 753 aaKnown RBP10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SH3BGRLO75368 114 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KLF7O75840 302 aaPredicted RBP10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TGFB1P01137 390 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 HEXBP07686 556 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 IL10P22301 178 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 JAK1P23458 1154 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SSR2P43308 183 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CCR10P46092 362 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 XCR1P46094 333 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PLA2G16P53816 162 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RRADP55042 308 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PKNOX1P55347 436 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 DNAJB13P59910 316 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 BTN3A2P78410 334 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KLC1Q07866 573 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 HYAL2Q12891 473 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 LCP2Q13094 533 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RCN2Q14257 317 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PCLAFQ15004 111 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MINDY4Q4G0A6 757 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TMEM35AQ53FP2 167 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 VWA2Q5GFL6 755 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FAM69BQ5VUD6 431 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FRG2Q64ET8 278 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ADNP2Q6IQ32 1131 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 VN1R5Q7Z5H4 357 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PDSS2Q86YH6 399 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZC3H7AQ8IWR0 971 aaKnown RBP10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 EXTL1Q92935 676 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PGM2Q96G03 612 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PEX11GQ96HA9 241 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FRG2BQ96QU4 278 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR1F2PQ96R84 312 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ZNF382Q96SR6 550 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MTERF1Q99551 399 aaKnown RBP10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RBCK1Q9BYM8 510 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TGIF2Q9GZN2 237 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 C12orf65Q9H3J6 166 aaKnown RBP10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CLK4Q9HAZ1 481 aaKnown RBP10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SSU72Q9NP77 194 aaKnown RBP10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KCNK9Q9NPC2 374 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OXSMQ9NWU1 459 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 SLC17A7Q9P2U7 560 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 C3orf18Q9UK00 162 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TSC22D4Q9Y3Q8 395 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ACTL7BQ9Y614 415 aa10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ANKRD11Q6UB99 2663 aaPredicted RBP10.41□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 CELSR3Q9NYQ7 3312 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 VSTM2BA6NLU5 285 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MAGEB17A8MXT2 336 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 IDSB3KWA1 339 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PCDH17O14917 1159 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TM9SF1O15321 606 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 TRIM13O60858 407 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 OR4F21O95013 312 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 B3GALT4O96024 378 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KRT6AP02538 564 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KRT6BP04259 564 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 ENO1P06733 434 aaKnown RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 UMODP07911 640 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 FURINP09958 794 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RNH1P13489 461 aaKnown RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MMP11P24347 488 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 PTX3P26022 381 aaPredicted RBP10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 KRT6CP48668 564 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 NAGLUP54802 743 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 EMP2P54851 167 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 MTTPP55157 894 aa10.4□□□□□ -0.74
CSPG4P2Y-201ENST00000306853 RPS13P62277 151 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms