RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SLC39A13Q96H72 371 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 KLHL1Q9NR64 748 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 YARS2Q9Y2Z4 477 aaKnown RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 A0A1B0GVM2 712 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ILVBLA1L0T0 632 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 MYL12BO14950 172 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 AREL1O15033 823 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 UPK1BO75841 260 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 RGS19P49795 217 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 RPS13P62277 151 aaKnown RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 VEPH1Q14D04 833 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ZNF697Q5TEC3 545 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ENTHD1Q8IYW4 607 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 HJURPQ8NCD3 748 aaPredicted RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 FBXO22Q8NEZ5 403 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ZNF486Q96H40 463 aaPredicted RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 IGSF21Q96ID5 467 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 FAM129BQ96TA1 746 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 P2RY13Q9BPV8 354 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 MACROD1Q9BQ69 325 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ASPNQ9BXN1 380 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ABCB8Q9NUT2 735 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 IL17CQ9P0M4 197 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 PCDHGB6Q9Y5F9 930 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 E7EQ34 232 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ZNF701M0R085 212 aaPredicted RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ADAMDEC1O15204 470 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 TLX2O43763 284 aaPredicted RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ERN1O75460 977 aaKnown RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 CCNDBP1O95273 360 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 KLK1P06870 262 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 OR56A5P0C7T3 313 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 SYN1P17600 705 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ITIH1P19827 911 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 KRT74Q7RTS7 529 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 CYB5D2Q8WUJ1 264 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 DNAJC11Q9NVH1 559 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 BACE2Q9Y5Z0 518 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 NPIPB15A6NHN6 443 aaPredicted RBP14.02□□□□□ -0.16
PTPN9-201ENST00000306726 TTC34A8MYJ7 566 aa14.02□□□□□ -0.16
PTPN9-201ENST00000306726 GADD45GO95257 159 aa14.02□□□□□ -0.16
PTPN9-201ENST00000306726 CNR2P34972 360 aa14.02□□□□□ -0.16
PTPN9-201ENST00000306726 CDH4P55283 916 aa14.02□□□□□ -0.16
PTPN9-201ENST00000306726 RETSATQ6NUM9 610 aa14.02□□□□□ -0.16
PTPN9-201ENST00000306726 KBTBD8Q8NFY9 601 aa14.02□□□□□ -0.16
PTPN9-201ENST00000306726 COL26A1Q96A83 441 aa14.02□□□□□ -0.16
PTPN9-201ENST00000306726 RANGRFQ9HD47 186 aaPredicted RBP14.02□□□□□ -0.16
PTPN9-201ENST00000306726 SPIN1Q9Y657 262 aaPredicted RBP14.02□□□□□ -0.16
PTPN9-201ENST00000306726 HYAL3O43820 417 aaPredicted RBP14.02□□□□□ -0.17
PTPN9-201ENST00000306726 CCNYL3P0C7X3 344 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 CCR7P32248 378 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 CDC42P60953 191 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 GRSF1Q12849 480 aaKnown RBP eCLIP14.02□□□□□ -0.17
PTPN9-201ENST00000306726 ZSWIM7Q19AV6 140 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF517Q6ZMY9 492 aaPredicted RBP14.02□□□□□ -0.17
PTPN9-201ENST00000306726 USP30Q70CQ3 517 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 GDPD3Q7L5L3 318 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 LAX1Q8IWV1 398 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 B3GNT7Q8NFL0 401 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 GGHQ92820 318 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 C1orf74Q96LT6 269 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 SLC35A5Q9BS91 424 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 OSGEPL1Q9H4B0 414 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 IL1RAPQ9NPH3 570 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 CFAP97Q9P2B7 532 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 MIA3Q5JRA6 1907 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 A0A1W2PPK0 400 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 CCDC182A6NF36 153 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 TMEM202A6NGA9 273 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 FRS3O43559 492 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 SLC35A2P78381 396 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF33AQ06730 810 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 ACOX1Q15067 660 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 FAM20CQ8IXL6 584 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 SLC32A1Q9H598 525 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 MSRAQ9UJ68 235 aa14.02□□□□□ -0.17
PTPN9-201ENST00000306726 PLK4O00444 970 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 STC2O76061 302 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 SOD2P04179 222 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 BUD31P41223 144 aaPredicted RBP14.01□□□□□ -0.17
PTPN9-201ENST00000306726 TARDBPQ13148 414 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTPN9-201ENST00000306726 CXorf57Q6NSI4 855 aaKnown RBP14.01□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF551Q7Z340 670 aaPredicted RBP14.01□□□□□ -0.17
PTPN9-201ENST00000306726 RAB43Q86YS6 212 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF614Q8N883 585 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 PAPD5Q8NDF8 572 aaKnown RBP14.01□□□□□ -0.17
PTPN9-201ENST00000306726 NLGN4YQ8NFZ3 816 aaPredicted RBP14.01□□□□□ -0.17
PTPN9-201ENST00000306726 FUBP3Q96I24 572 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTPN9-201ENST00000306726 AKIP1Q9NQ31 210 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 TAS2R9Q9NYW1 312 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 VPS29Q9UBQ0 182 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 WASHC1A8K0Z3 465 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 IGLV3-25P01717 112 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 CYP2A7P20853 494 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 HNRNPA0Q13151 305 aaKnown RBP14.01□□□□□ -0.17
PTPN9-201ENST00000306726 GBX1Q14549 363 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 SMU1Q2TAY7 513 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF284Q2VY69 593 aa14.01□□□□□ -0.17
PTPN9-201ENST00000306726 C10orf62Q5T681 223 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms