RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 RASGRP3Q8IV61 690 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 CCDC116Q8IYX3 515 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 OR51L1Q8NGJ5 315 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 TMIGD2Q96BF3 282 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 TMEM80Q96HE8 168 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 FAM83CQ9BQN1 747 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 IDI2Q9BXS1 227 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 HSD3B7Q9H2F3 369 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 SRA1Q9HD15 236 aaKnown RBP11.96□□□□□ -0.49
ABCA3-201ENST00000301732 NLGN3Q9NZ94 848 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 CNTN3Q9P232 1028 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 MSRAQ9UJ68 235 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 ACSL6Q9UKU0 697 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 PCDHB14Q9Y5E9 798 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 CAMSAP1Q5T5Y3 1602 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 CDC42BPAQ5VT25 1732 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 NPIPA5E9PKD4 350 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 DYRK1AQ13627 763 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 TAF1AQ15573 450 aaPredicted RBP11.96□□□□□ -0.49
ABCA3-201ENST00000301732 SMAD2Q15796 467 aaKnown RBP11.96□□□□□ -0.49
ABCA3-201ENST00000301732 COL28A1Q2UY09 1125 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 DCDC5Q6ZRR9 648 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 PLPPR4Q7Z2D5 763 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 AMZ2Q86W34 360 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF227Q86WZ6 799 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 TREML1Q86YW5 311 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 PNLDC1Q8NA58 520 aaKnown RBP11.96□□□□□ -0.49
ABCA3-201ENST00000301732 ABHD5Q8WTS1 349 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 DDX1Q92499 740 aaKnown RBP11.96□□□□□ -0.49
ABCA3-201ENST00000301732 DGAT2Q96PD7 388 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 HINT2Q9BX68 163 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 P2RX2Q9UBL9 471 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 NPIPA1Q9UND3 350 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 KRBA1A5PL33 1030 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 THOC6Q86W42 341 aaKnown RBP11.96□□□□□ -0.5
ABCA3-201ENST00000301732 MAB21L2Q9Y586 359 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 PCDHGA11Q9Y5H2 935 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 SLC38A8A6NNN8 435 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 OGDHQ02218 1023 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 FUT10Q6P4F1 479 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 TICAM1Q8IUC6 712 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 Q8N402 240 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 C17orf62Q9BQA9 187 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 RNF39Q9H2S5 420 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 NUFIP1Q9UHK0 495 aaKnown RBP11.96□□□□□ -0.5
ABCA3-201ENST00000301732 BEST1O76090 585 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 DAOAP59103 153 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 FPGSQ05932 587 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 LRRC52Q8N7C0 313 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 TOR1AIP2Q8NFQ8 470 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 IL12RB2Q99665 862 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 SIX2Q9NPC8 291 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 UBQLN2Q9UHD9 624 aa11.96□□□□□ -0.5
ABCA3-201ENST00000301732 MADDQ8WXG6 1647 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 ILVBLA1L0T0 632 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 OR12D1P0DN82 309 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 SMSP52788 366 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 OAZ1P54368 228 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 HNRNPKP61978 463 aaKnown RBP eCLIP11.95□□□□□ -0.5
ABCA3-201ENST00000301732 CAP1Q01518 475 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 PCLAFQ15004 111 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 SLC10A6Q3KNW5 377 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 COMMD7Q86VX2 200 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 ESX1Q8N693 406 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 NPRL2Q8WTW4 380 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 LMF1Q96S06 567 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 FEZF1A0PJY2 475 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 CFIP05156 583 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 PRPS2P11908 318 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 BMXP51813 675 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 MAP4K2Q12851 820 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 POU4F3Q15319 338 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 CYBRD1Q53TN4 286 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 KLBQ86Z14 1044 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 TMEM68Q96MH6 324 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 PFDN5Q99471 154 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 SYNPO2LQ9H987 977 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 KCNK12Q9HB15 430 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 ATRNL1Q5VV63 1379 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 ERCC6L2Q5T890 1561 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 B4GALT4O60513 344 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 OR2B3O76000 313 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 ASGR1P07306 291 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 FBXO45P0C2W1 286 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 MLLT3P42568 568 aaPredicted RBP11.95□□□□□ -0.5
ABCA3-201ENST00000301732 MAP2K5Q13163 448 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 SHQ1Q6PI26 577 aaKnown RBP11.95□□□□□ -0.5
ABCA3-201ENST00000301732 PIWIL3Q7Z3Z3 882 aaKnown RBP11.95□□□□□ -0.5
ABCA3-201ENST00000301732 TMEM17Q86X19 198 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 IQCF1Q8N6M8 205 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 ASCC1Q8N9N2 400 aaKnown RBP11.95□□□□□ -0.5
ABCA3-201ENST00000301732 S100A16Q96FQ6 103 aaKnown RBP11.95□□□□□ -0.5
ABCA3-201ENST00000301732 EMC3Q9P0I2 261 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 PDE4DIPQ5VU43 2346 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 MANSC4A6NHS7 340 aaPredicted RBP11.95□□□□□ -0.5
ABCA3-201ENST00000301732 NUAK1O60285 661 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 HTR1AP08908 422 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 SCNN1AP37088 669 aa11.95□□□□□ -0.5
ABCA3-201ENST00000301732 NSG1P42857 185 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms