RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SPATA33Q96N06 139 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 DIABLOQ9NR28 239 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 NDUFS6O75380 124 aaKnown RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 SIX6O95475 246 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 ESR1P03372 595 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 PRKAR1AP10644 381 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 S100A3P33764 101 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 GRK1Q15835 563 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 FAM209BQ5JX69 171 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 TMPRSS9Q7Z410 1059 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 TAC4Q86UU9 113 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 B3GALNT2Q8NCR0 500 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 OR10G2Q8NGC3 310 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 OR52P1PQ8NH57 321 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 PANX1Q96RD7 426 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 PAK6Q9NQU5 681 aaPredicted RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 TRPM5Q9NZQ8 1165 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 RCOR3Q9P2K3 495 aaPredicted RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 NCKAP1Q9Y2A7 1128 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 SPIN1Q9Y657 262 aaPredicted RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 PRRC2BQ5JSZ5 2229 aaKnown RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 ORC5O43913 435 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 PIP5K1CO60331 668 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 KERAO60938 352 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 VPS4BO75351 444 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 RAF1P04049 648 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 CRHR2Q13324 411 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 CRTC2Q53ET0 693 aaPredicted RBP13.87□□□□□ -0.19
CDT1-201ENST00000301019 BMPERQ8N8U9 685 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 OR11H7Q8NGC8 314 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 FCRL5Q96RD9 977 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 COPS8Q99627 209 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 RTP3Q9BQQ7 232 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 NIPAL2Q9H841 368 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 SLC28A3Q9HAS3 691 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 MRPL15Q9P015 296 aaKnown RBP13.87□□□□□ -0.19
CDT1-201ENST00000301019 KLHL21Q9UJP4 597 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 A0A1W2PPL8 197 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 CASKO14936 926 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 MUSKO15146 869 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 NCAM2O15394 837 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 LANCL1O43813 399 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 TPST2O60704 377 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 ENTPD6O75354 484 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 HMBSP08397 361 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 PRR35P0CG20 571 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 ENGP17813 658 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 FDXRP22570 491 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 CNR2P34972 360 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 CLEC20AQ6ZU45 233 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 METTL3Q86U44 580 aaKnown RBP13.87□□□□□ -0.19
CDT1-201ENST00000301019 MS4A15Q8N5U1 240 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 OR10Z1Q8NGY1 313 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 C2CD4CQ8TF44 421 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 ULK4Q96C45 1275 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 GTPBP2Q9BX10 602 aaKnown RBP13.87□□□□□ -0.19
CDT1-201ENST00000301019 SSR3Q9UNL2 185 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 MGAT4BQ9UQ53 548 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 WDR90Q96KV7 1748 aa13.87□□□□□ -0.19
CDT1-201ENST00000301019 H3BN98 237 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 E2F3O00716 465 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 HTR7P34969 479 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ETV6P41212 452 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 LGI4Q8N135 537 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 SCAMP5Q8TAC9 235 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ART5Q96L15 291 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 RBP7Q96R05 134 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 TMEM121BQ9BXQ6 578 aaPredicted RBP13.86□□□□□ -0.19
CDT1-201ENST00000301019 RNF39Q9H2S5 420 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 AGO3Q9H9G7 860 aaKnown RBP13.86□□□□□ -0.19
CDT1-201ENST00000301019 TBC1D17Q9HA65 648 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 TAS2R13Q9NYV9 303 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 DNAH14Q0VDD8 3507 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 TRBV23-1A0A0A0MS06 115 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 C2orf92A0A1B0GVN3 265 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ZNF487B1APH4 448 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 NPR3P17342 541 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 PGFP49763 221 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 CLCNKAP51800 687 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 EXOC3L2Q2M3D2 409 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 FBXO47Q5MNV8 452 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 SPOUT1Q5T280 376 aaKnown RBP13.86□□□□□ -0.19
CDT1-201ENST00000301019 TMEM88Q6PEY1 159 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 USP30Q70CQ3 517 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 GOLGA7Q7Z5G4 137 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ARHGAP12Q8IWW6 846 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 FBXO16Q8IX29 292 aaPredicted RBP13.86□□□□□ -0.19
CDT1-201ENST00000301019 RGL4Q8IZJ4 473 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 PSMG2Q969U7 264 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 HRASLS5Q96KN8 279 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 SP110Q9HB58 689 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 RRAGCQ9HB90 399 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 HOXC10Q9NYD6 342 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 UBQLN2Q9UHD9 624 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ELF5Q9UKW6 265 aaPredicted RBP13.86□□□□□ -0.19
CDT1-201ENST00000301019 RAI2Q9Y5P3 530 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 MYBPHLA2RUH7 354 aa13.86□□□□□ -0.19
CDT1-201ENST00000301019 ZNF286BP0CG31 522 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms