RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 AGBL3Q8NEM8 1001 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 PAQR8Q8TEZ7 354 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 DCUN1D4Q92564 292 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 GCM1Q9NP62 436 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SIX4Q9UIU6 781 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 OR5H15A6NDH6 313 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 OR5H14A6NHG9 310 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 OR5H1A6NKK0 313 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 IL7RP16871 459 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 RAB28P51157 221 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 ALG3Q92685 438 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 TNS2Q63HR2 1409 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC2A1P11166 492 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 RIDAP52758 137 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SLAMF9Q96A28 289 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 CAMK1GQ96NX5 476 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 ARHGAP21Q5T5U3 1957 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 IGFBP1P08833 259 aaPredicted RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 AVPR1BP47901 424 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 FAM35AQ86V20 835 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 KCNU1A8MYU2 1149 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 LIASO43766 372 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 UBBP0CG47 229 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 UBCP0CG48 685 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC7A1P30825 629 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 RPS27AP62979 156 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 UBA52P62987 128 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 DAG1Q14118 895 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 UNC5AQ6ZN44 842 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC35C1Q96A29 364 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 BTF3L4Q96K17 158 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 EML6Q6ZMW3 1958 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 TSFMP43897 325 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 RAB8AP61006 207 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 UBE2UQ5VVX9 321 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 BAGE3Q86Y29 109 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC35F3Q8IY50 421 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 TMEM199Q8N511 208 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 HEBP1Q9NRV9 189 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 TAS2R16Q9NYV7 291 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 NPFFR2Q9Y5X5 522 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 THP07101 528 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 AIF1P55008 147 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 CD47Q08722 323 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 AGAP7PQ5VUJ5 663 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 AGAP6Q5VW22 663 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 RASGEF1CQ8N431 466 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 OR1E3Q8WZA6 343 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 AGAP4Q96P64 663 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 F8VP50 259 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 NT5EP21589 574 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 GBE1Q04446 702 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 CRB2Q5IJ48 1285 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 CXCR6O00574 342 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 NPC1O15118 1278 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 METTL15P1P0C7V9 234 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 JUPP14923 745 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 HNF1AP20823 631 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 GJA5P36382 358 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 ATAT1Q5SQI0 421 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 SDSLQ96GA7 329 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 ADAM7Q9H2U9 754 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 DUSP22Q9NRW4 184 aa10.84□□□□□ -0.67
HDGFL3-201ENST00000299633 A0A1W2PS29 197 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 MT-ND5P03915 603 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 RAP2AP10114 183 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 SSR2P43308 183 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 PSPHP78330 225 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 KLF10Q13118 480 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 ZC3H14Q6PJT7 736 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 RDH10Q8IZV5 341 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC19A3Q9BZV2 496 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 C3P01024 1663 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 ATP5A1P25705 553 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 BAMBIQ13145 260 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 LASP1Q14847 261 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 IL17AQ16552 155 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 CFAP77Q6ZQR2 320 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 PDSS2Q86YH6 399 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 CXorf40AQ8TE69 158 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 AGAP14A8MT82 685 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 GAD2Q05329 585 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 DBPQ10586 325 aaPredicted RBP10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 ANKRD46Q86W74 232 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 LPGAT1Q92604 370 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 ALKBH4Q9NXW9 302 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 YBX3P16989 372 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 ACOT11Q8WXI4 607 aaPredicted RBP10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 BIRC8Q96P09 236 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 PENKP01210 267 aaPredicted RBP10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 ADH1AP07327 375 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 AQP2P41181 271 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 DPP6P42658 865 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 MAP2K3P46734 347 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC2A14Q8TDB8 520 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 SMPDL3AQ92484 453 aa10.83□□□□□ -0.68
HDGFL3-201ENST00000299633 PMEPA1Q969W9 287 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms