RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 THEGLP0DJG4 465 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 IL10P22301 178 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 CMPK1P30085 196 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 GRK3P35626 688 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 SLC19A1P41440 591 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 SFT2D3Q587I9 215 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 TBCELQ5QJ74 424 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 FAM71E1Q6IPT2 247 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 TLDC1Q6P9B6 456 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 IKBIPQ70UQ0 350 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 CLECL1Q8IZS7 167 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 ADCY4Q8NFM4 1077 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 OR4E2Q8NGC2 313 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 SVIPQ8NHG7 77 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 F2RL3Q96RI0 385 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 SORBS1Q9BX66 1292 aaKnown RBP13.63□□□□□ -0.23
C9orf3-202ENST00000297979 TMEM184CQ9NVA4 438 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 ATAD3AQ9NVI7 634 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 SH3BP4Q9P0V3 963 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 HEATR5BQ9P2D3 2071 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 SPTY2D1-AS1A0A0U1RR47 76 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 TMEM221A6NGB7 291 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 YY2O15391 372 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 LCMT2O60294 686 aaKnown RBP13.63□□□□□ -0.23
C9orf3-202ENST00000297979 KLHL18O94889 574 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 FURINP09958 794 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 UMPSP11172 480 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 TAS2R50P59544 299 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 LRRC74AQ0VAA2 488 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 PDE7AQ13946 482 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 PLD3Q8IV08 490 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 FAM20CQ8IXL6 584 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 FBXL6Q8N531 539 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 GPBAR1Q8TDU6 330 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 FAM120BQ96EK7 910 aaKnown RBP13.63□□□□□ -0.23
C9orf3-202ENST00000297979 CENPKQ9BS16 269 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 GSDMCQ9BYG8 508 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 BHLHE41Q9C0J9 482 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-202ENST00000297979 LRCH1Q9Y2L9 728 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 TRBV23OR9-2A0A075B6M9 112 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 ELOVL7A1L3X0 281 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 ISM1B1AKI9 464 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 GSTA4O15217 222 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 NDUFS4O43181 175 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 HNRNPRO43390 633 aaKnown RBP13.63□□□□□ -0.23
C9orf3-202ENST00000297979 CLEC3AO75596 197 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 TIPRLO75663 272 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 EPN2O95208 641 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 CPSF4O95639 269 aaKnown RBP13.63□□□□□ -0.23
C9orf3-202ENST00000297979 ANXA6P08133 673 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 POLE2P56282 527 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 C2orf80Q0P641 193 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 MAP7Q14244 749 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 CCNYL2Q5T2Q4 361 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 PAGE2Q7Z2X7 111 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 CALHM3Q86XJ0 350 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 MICU2Q8IYU8 434 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 SIX5Q8N196 739 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 PPWD1Q96BP3 646 aaKnown RBP13.63□□□□□ -0.23
C9orf3-202ENST00000297979 PPCDCQ96CD2 204 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 NELL2Q99435 816 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 ORAI3Q9BRQ5 295 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 DPH7Q9BTV6 452 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 TBCDQ9BTW9 1192 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 ZNF717Q9BY31 904 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-202ENST00000297979 SRMSQ9H3Y6 488 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 ANAPC2Q9UJX6 822 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 EVPLLA8MZ36 301 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 RNASET2O00584 256 aaKnown RBP13.62□□□□□ -0.23
C9orf3-202ENST00000297979 CAPNS1P04632 268 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 AQP4P55087 323 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 ABHD18Q0P651 414 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 FZD2Q14332 565 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 ZNF385BQ569K4 471 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 MTX3Q5HYI7 312 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 ZNF621Q6ZSS3 439 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 ERMP1Q7Z2K6 904 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 ADHFE1Q8IWW8 467 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 TBC1D19Q8N5T2 526 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 FAM174AQ8TBP5 190 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 FAM110BQ8TC76 370 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 MTERF3Q96E29 417 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 QRFPRQ96P65 431 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 TCEAL2Q9H3H9 227 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-202ENST00000297979 ARHGAP10A1A4S6 786 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 IL3P08700 152 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 EFNA1P20827 205 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-202ENST00000297979 GSTM2P28161 218 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 BSGP35613 385 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 BCL6P41182 706 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 GZMMP51124 257 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 MC1RQ01726 317 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 PRRT3Q5FWE3 981 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 IYDQ6PHW0 289 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 TRIM48Q8IWZ4 208 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 CREB3L4Q8TEY5 395 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 FIG4Q92562 907 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 RGMAQ96B86 450 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 KLHDC7BQ96G42 594 aa13.62□□□□□ -0.23
C9orf3-202ENST00000297979 SLC6A18Q96N87 628 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms