RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 APOC3P02656 99 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 GGT5P36269 586 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 GPAT3Q53EU6 434 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 PPCDCQ96CD2 204 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SH3YL1Q96HL8 342 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 RDH12Q96NR8 316 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 NPLQ9BXD5 320 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 STRADBQ9C0K7 418 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SRMSQ9H3Y6 488 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 BEX1Q9HBH7 125 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC35C2Q9NQQ7 365 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 NECTIN3Q9NQS3 549 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 RPL36Q9Y3U8 105 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 TRBV23OR9-2A0A075B6M9 112 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 FXYD6-FXYD2A0A087WZ82 144 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 A0A0X1KG70 313 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 GADD45GO95257 159 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 HOXC13P31276 330 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 RPL3P39023 403 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 RPL35P42766 123 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 WNT7BP56706 349 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 HERVK_113P63132 956 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SCAPQ12770 1279 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 CAMK1Q14012 370 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SIX1Q15475 284 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 PPP1R3AQ16821 1122 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 IFI44LQ53G44 452 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 C14orf80Q86SX3 495 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 OR13J1Q8NGT2 312 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 PGAP3Q96FM1 320 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 ASPNQ9BXN1 380 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 ERVK-6Q9BXR3 956 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 FXYD6Q9H0Q3 95 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 PPIL3Q9H2H8 161 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 DPAGT1Q9H3H5 408 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 ZNF334Q9HCZ1 680 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 CD93Q9NPY3 652 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 HEBP1Q9NRV9 189 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SEMA3GQ9NS98 782 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 HCN2Q9UL51 889 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 PPIEQ9UNP9 301 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 ENTPD4Q9Y227 616 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 B4DGG1 531 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 PLATP00750 562 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 ESR1P03372 595 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 GSTM2P28161 218 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 UFM1P61960 85 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 LRRC73Q5JTD7 316 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 DESI1Q6ICB0 168 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 OXR1Q8N573 874 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 GLB1L3Q8NCI6 653 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 FAM46DQ8NEK8 389 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 DEDD2Q8WXF8 326 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 LINC00597Q9H2U6 94 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 CHMP1AQ9HD42 196 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 IL1RAPQ9NPH3 570 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 ANKMY1Q9P2S6 941 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SEC14L3Q9UDX4 400 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 UBQLN2Q9UHD9 624 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 FKBPLQ9UIM3 349 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SDHDO14521 159 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 ALDOAP04075 364 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 PLA2G16P53816 162 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 ZC3HC1Q86WB0 502 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 CADM2Q8N3J6 435 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 C7orf57Q8NEG2 295 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 KAT2AQ92830 837 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 KCNN1Q92952 543 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 MYRFLQ96LU7 910 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 DPCDQ9BVM2 203 aaPredicted RBP10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 MAT2BQ9NZL9 334 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 TRAV6A0A075B6T7 132 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 MAGEB17A8MXT2 336 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC7A4O43246 635 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 STK16O75716 305 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 ACSL1P33121 698 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 ZNF234Q14588 700 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 GCNT6Q5T4J0 391 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 KIF18BQ86Y91 864 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 SNX29P2Q8IUI4 249 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 TOMM5Q8N4H5 51 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 RAD51AP1Q96B01 352 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 DHRS1Q96LJ7 313 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 AIF1LQ9BQI0 150 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 TPSD1Q9BZJ3 242 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 POU2F3Q9UKI9 436 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 CMAHPQ9Y471 501 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 MYO5AQ9Y4I1 1855 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 E7ESA3 106 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 KMOO15229 486 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 FPR1P21462 350 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 TSPAN5P62079 268 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 RPS14P62263 151 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 TXNL4AP83876 142 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC25A11Q02978 314 aaKnown RBP10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 TANGO2Q6ICL3 276 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 ZNF767PQ75MW2 155 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
NPC1L1-201ENST00000289547 LGI4Q8N135 537 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms