RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RAB42Q8N4Z0 105 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 DMRTB1Q96MA1 342 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 RDH12Q96NR8 316 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ALPK1Q96QP1 1244 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 DOHHQ9BU89 302 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 FNDC11Q9BVV2 318 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 C1QTNF3Q9BXJ4 246 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 H2AFY2Q9P0M6 372 aaPredicted RBP15.28■□□□□ 0.04
SMAD6-201ENST00000288840 CORO2BQ9UQ03 480 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 CAB39Q9Y376 341 aaPredicted RBP15.28■□□□□ 0.04
SMAD6-201ENST00000288840 AP2A2O94973 939 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 TSPAN19P0C672 248 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 CCDC159P0C7I6 412 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 TIA1P31483 386 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 CLK3P49761 638 aaKnown RBP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 CLCNKAP51800 687 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 TEAD4Q15561 434 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 ADPRMQ3LIE5 342 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 ALG1LQ6GMV1 187 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 ARMC8Q8IUR7 673 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 SLC39A11Q8N1S5 342 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 TRUB1Q8WWH5 349 aaKnown RBP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 TFGQ92734 400 aaPredicted RBP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 KCNK12Q9HB15 430 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 WDR90Q96KV7 1748 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 SCAMP2O15127 329 aaKnown RBP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 PTPN2P17706 415 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 MLLT1Q03111 559 aaPredicted RBP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 TPRG1LQ5T0D9 272 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 DCST1Q5T197 706 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 C9orf64Q5T6V5 341 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 CELF5Q8N6W0 485 aaKnown RBP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 OR2A12Q8NGT7 310 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 BTN2A2Q8WVV5 523 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 MTERF3Q96E29 417 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 CSF3RQ99062 836 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 ZCCHC3Q9NUD5 404 aaKnown RBP15.27■□□□□ 0.04
SMAD6-201ENST00000288840 RLIMQ9NVW2 624 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 ENPP5Q9UJA9 477 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 OTOFQ9HC10 1997 aa15.27■□□□□ 0.04
SMAD6-201ENST00000288840 UPK1AO00322 258 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 GP2P55259 537 aaKnown RBP15.27■□□□□ 0.03
SMAD6-201ENST00000288840 CD300CQ08708 224 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 MAD2L1BPQ15013 274 aaPredicted RBP15.27■□□□□ 0.03
SMAD6-201ENST00000288840 ZC3H12BQ5HYM0 836 aaKnown RBP15.27■□□□□ 0.03
SMAD6-201ENST00000288840 PRAMEF14Q5SWL7 426 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 PRAMEF13Q5VWM6 474 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 LHX8Q68G74 356 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 TCEAL8Q8IYN2 117 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 SLC43A3Q8NBI5 491 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 KBTBD8Q8NFY9 601 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 ZNF675Q8TD23 568 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 POLR2J3Q9H1A7 115 aaKnown RBP15.27■□□□□ 0.03
SMAD6-201ENST00000288840 REEP4Q9H6H4 257 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 SBF1O95248 1867 aa15.27■□□□□ 0.03
SMAD6-201ENST00000288840 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.26■□□□□ 0.03
SMAD6-201ENST00000288840 ISM1B1AKI9 464 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 PCDH17O14917 1159 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 AREL1O15033 823 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 PRSS23O95084 383 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 RPLP0P05388 317 aaKnown RBP15.26■□□□□ 0.03
SMAD6-201ENST00000288840 GSTM5P46439 218 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 UGT2B15P54855 530 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 PFN3P60673 137 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 DSTNP60981 165 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 ZNF404Q494X3 552 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 LIPJQ5W064 366 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 ZDHHC20Q5W0Z9 365 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.26■□□□□ 0.03
SMAD6-201ENST00000288840 TCEANCQ8N8B7 351 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 OR8D1Q8WZ84 308 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 DNASE1L2Q92874 299 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 PAWRQ96IZ0 340 aaKnown RBP15.26■□□□□ 0.03
SMAD6-201ENST00000288840 KCNK6Q9Y257 313 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 KRBA1A5PL33 1030 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 QSOX1O00391 747 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 ZFP36L2P47974 494 aaKnown RBP15.26■□□□□ 0.03
SMAD6-201ENST00000288840 GAB1Q13480 694 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 SNAPC1Q16533 368 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 SLC5A12Q1EHB4 618 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 FAM129CQ86XR2 697 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 USP7Q93009 1102 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 NRTNQ99748 197 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 POLR2J2Q9GZM3 115 aaKnown RBP15.26■□□□□ 0.03
SMAD6-201ENST00000288840 ERVK13-1Q9NX77 482 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 PCDHGA10Q9Y5H3 936 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 HIDE1A8MVS5 230 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 GAPDHSO14556 408 aaPredicted RBP15.26■□□□□ 0.03
SMAD6-201ENST00000288840 PCDHGA12O60330 932 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 TMCC2O75069 709 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 SEC14L2O76054 403 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 ABLIM3O94929 683 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 RAB8AP61006 207 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 DSG4Q86SJ6 1040 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 PAPD5Q8NDF8 572 aaKnown RBP15.26■□□□□ 0.03
SMAD6-201ENST00000288840 DNAJB8Q8NHS0 232 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 ZNF480Q8WV37 535 aa15.26■□□□□ 0.03
SMAD6-201ENST00000288840 SLC35F4A4IF30 521 aa15.25■□□□□ 0.03
SMAD6-201ENST00000288840 PITPNM1O00562 1244 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms