RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SLC35A5Q9BS91 424 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 ZNF556Q9HAH1 456 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 STOX2Q9P2F5 926 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-201ENST00000286749 MN1Q10571 1320 aaPredicted RBP12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 HOXA2O43364 376 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 SGTAO43765 313 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 TNFRSF21O75509 655 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 EFEMP2O95967 443 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 GBAP04062 536 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 GSTM1P09488 218 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 TIA1P31483 386 aaKnown RBP eCLIP12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 SOX6P35712 828 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 HNF4AP41235 474 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 BDKRB1P46663 353 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 IFITM2Q01629 132 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 DOC2BQ14184 412 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 GANABQ14697 944 aaKnown RBP12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 EIF4HQ15056 248 aaKnown RBP12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 GCNT6Q5T4J0 391 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 C22orf39Q6P5X5 142 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 CRIPAKQ8N1N5 446 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 OR7G3Q8NG95 312 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 CHTF18Q8WVB6 975 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 ASZ1Q8WWH4 475 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 SAMD11Q96NU1 681 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 ZIC5Q96T25 663 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 NUAK2Q9H093 628 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 BRF2Q9HAW0 419 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 C14orf119Q9NWQ9 140 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 LSM7Q9UK45 103 aaKnown RBP12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 PPIL1Q9Y3C6 166 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 KLK4Q9Y5K2 254 aa12.71□□□□□ -0.38
SLC28A1-201ENST00000286749 PLK4O00444 970 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 RNASET2O00584 256 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 CTDSP2O14595 271 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 KPNA5O15131 536 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 ZW10O43264 779 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 C6orf47O95873 294 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 HSD3B1P14060 373 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 TCEA1P23193 301 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 PTX3P26022 381 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 HSD3B2P26439 372 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 BMPR1AP36894 532 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 PREPP48147 710 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 PRIM2P49643 509 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 DGKEP52429 567 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 DEFA1P59665 94 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 DEFA3P59666 94 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 RPS13P62277 151 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 CYP4F8P98187 520 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 TEKQ02763 1124 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 KCNC3Q14003 757 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 PTGES3Q15185 160 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 DPY19L3Q6ZPD9 716 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 UTS2BQ765I0 119 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 PSD4Q8NDX1 1056 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 SDHCQ99643 169 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 MGLLQ99685 303 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 TMEM121BQ9BXQ6 578 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 FBXL12Q9NXK8 326 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 CFAP97Q9P2B7 532 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 OGDHLQ9ULD0 1010 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 KIAA1671Q9BY89 1806 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 DOCK6Q96HP0 2047 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 SLC10A3P09131 477 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 SPIN4Q56A73 249 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 OTOP2Q7RTS6 562 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 METTL3Q86U44 580 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 CCDC190Q86UF4 302 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 RASGRP3Q8IV61 690 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 LILRA3Q8N6C8 439 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 OR5AK3PQ8NH89 298 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 FIBINQ8TAL6 211 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 CIDECQ96AQ7 238 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 ZNF486Q96H40 463 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 TSEN34Q9BSV6 310 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 THSD1Q9NS62 852 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 ACER3Q9NUN7 267 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 ERVK13-1Q9NX77 482 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 MKLN1Q9UL63 735 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 MAP4K5Q9Y4K4 846 aa12.7□□□□□ -0.38
SLC28A1-201ENST00000286749 PRAMEF33A0A0G2JMD5 474 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 PNMA8CA0A1B0GUJ8 204 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 PRAMEF10O60809 474 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 PSIP1O75475 530 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 SLCO2B1O94956 709 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 APOA1P02647 267 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 CKMP06732 381 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 ZNF8P17098 575 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 PIK3CBP42338 1070 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 COPZ1P61923 177 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 MC1RQ01726 317 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 KRR1Q13601 381 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 MPPE1Q53F39 396 aa12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 RSBN1Q5VWQ0 802 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-201ENST00000286749 TPGS2Q68CL5 300 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms