RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 GALNT6Q8NCL4 622 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CLHC1Q8NHS4 586 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ELMO1Q92556 727 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CXorf40BQ96DE9 158 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 APIPQ96GX9 242 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 Q96MT0 163 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 NEDD4LQ96PU5 975 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 BRF2Q9HAW0 419 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 DIABLOQ9NR28 239 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ERVK13-1Q9NX77 482 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ARL15Q9NXU5 204 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 AFF4Q9UHB7 1163 aaKnown RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 KLK4Q9Y5K2 254 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 DENND4CQ5VZ89 1909 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 KPNA5O15131 536 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 TLL1O43897 1013 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 IL7P13232 177 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ARHGEF6Q15052 776 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 TEAD4Q15561 434 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CPSF6Q16630 551 aaKnown RBP eCLIP9.99□□□□□ -0.81
SKA1-201ENST00000285116 ATXN7L2Q5T6C5 722 aaPredicted RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 OR4F3Q6IEY1 312 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 C19orf48Q6RUI8 117 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CCDC28AQ8IWP9 274 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CADM2Q8N3J6 435 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 DNAJC22Q8N4W6 341 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 DENND6BQ8NEG7 585 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 VOPP1Q96AW1 172 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ECHDC3Q96DC8 303 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CRELD1Q96HD1 420 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 MCCC1Q96RQ3 725 aaPredicted RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 CHCHD6Q9BRQ6 235 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CENPOQ9BU64 300 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 C2orf49Q9BVC5 232 aaPredicted RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 RNF167Q9H6Y7 350 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 DNAJC11Q9NVH1 559 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 SIRT5Q9NXA8 310 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 RUVBL1Q9Y265 456 aaKnown RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 FCF1Q9Y324 198 aaKnown RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 A0A0U1RQS6 177 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 CLCA1A8K7I4 914 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 TMEM229AB2RXF0 380 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 PLK4O00444 970 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 TBL1XO60907 577 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 GABRB1P18505 474 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 NUDT1P36639 197 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 RFX2P48378 723 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 RGS6P49758 472 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 SYCE2Q6PIF2 218 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 UBE2R2Q712K3 238 aaPredicted RBP9.98□□□□□ -0.81
SKA1-201ENST00000285116 C16orf59Q7L2K0 433 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 FAM124AQ86V42 546 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 NLRP8Q86W28 1048 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 ZSWIM9Q86XI8 627 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 OR4C15Q8NGM1 316 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 OR10Q1Q8NGQ4 319 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 GOT1L1Q8NHS2 421 aaPredicted RBP9.98□□□□□ -0.81
SKA1-201ENST00000285116 WDR20Q8TBZ3 569 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 SLC7A6Q92536 515 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 COL21A1Q96P44 957 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 TSSK3Q96PN8 268 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 C3orf14Q9HBI5 128 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 PRDM8Q9NQV8 689 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 DYRK4Q9NR20 520 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 THSD1Q9NS62 852 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
SKA1-201ENST00000285116 FNDC3AQ9Y2H6 1198 aaKnown RBP9.98□□□□□ -0.81
SKA1-201ENST00000285116 ARRDC5A6NEK1 342 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 ADAMDEC1O15204 470 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 ABLIM3O94929 683 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 CLDN7O95471 211 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 OLFM2O95897 454 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 GALTP07902 379 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 OR56A5P0C7T3 313 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 CCR7P32248 378 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 CSKP41240 450 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 ASMTP46597 345 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 CRYBA2P53672 197 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 GPLD1P80108 840 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 B4GALNT1Q00973 533 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 TIMM50Q3ZCQ8 353 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 GPAT3Q53EU6 434 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 SOWAHCQ53LP3 525 aaPredicted RBP9.98□□□□□ -0.81
SKA1-201ENST00000285116 Q5BKY6 102 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 ARMCX4Q5H9R4 360 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 MPP7Q5T2T1 576 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 TPRG1Q6ZUI0 275 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 SPRED2Q7Z698 418 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 CYP4Z2PQ8N1L4 340 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 FAM109AQ8N4B1 249 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 C9orf43Q8TAL5 461 aaPredicted RBP9.98□□□□□ -0.81
SKA1-201ENST00000285116 WBP2Q969T9 261 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 COQ8BQ96D53 544 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 PANX1Q96RD7 426 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 DOHHQ9BU89 302 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 MKRN2Q9H000 416 aaKnown RBP9.98□□□□□ -0.81
SKA1-201ENST00000285116 RUBCNLQ9H714 662 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 STARD7Q9NQZ5 370 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 GKN1Q9NS71 199 aa9.98□□□□□ -0.81
SKA1-201ENST00000285116 SPASTQ9UBP0 616 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms